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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 3
  • vacuole 2
  • mitochondrion 2
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:plastid
EpiLoc:vacuole
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:cytosol
PProwler:secretory
TargetP:plastid
YLoc:plastid
 extracellular: 19038476
extracellular: 19226311
extracellular: 21255809
extracellular: 23159799
extracellular: 24083427
extracellular: 25047395
extracellular: 28232208
msms PMID: 25047395 doi
JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.
msms PMID: 23159799 doi
SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang
Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.
msms PMID: 21255809 doi
T Shinano, S Komatsu, T Yoshimura, S Tokutake, FJ Kong, T Watanabe, J Wasaki, M Osaki
National Agriculture and Food Research Organization, National Agricultural Research Center for Hokkaido Region, 1-Hitsujigaoka, Toyohira-ku, Sapporo 062-8555, Japan. shinano@affrc.go.jp
msms PMID: 24083427 doi
T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
msms PMID: 19226311 doi
WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim
Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.
msms PMID: 19038476 doi
XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim
Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.
msms PMID: 28232208 doi
Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os03t0663500-00 Rice extracellular 64.06 82.19
OQU91235 Sorghum extracellular 62.28 75.76
TraesCS4B01G017300.1 Wheat cytosol, mitochondrion 46.26 75.14
TraesCS4D01G015800.1 Wheat unclear 61.92 74.68
Zm00001d033455_P001 Maize extracellular 60.14 73.48
TraesCS4A01G296300.1 Wheat extracellular, unclear 59.79 73.36
GSMUA_Achr6P31470_001 Banana endoplasmic reticulum, extracellular 45.2 68.65
HORVU4Hr1G002650.2 Barley extracellular 61.21 67.45
VIT_02s0025g04260.t01 Wine grape extracellular 41.64 67.24
VIT_02s0025g04250.t01 Wine grape extracellular 53.02 66.22
VIT_02s0025g04270.t01 Wine grape extracellular 52.67 65.78
VIT_02s0025g04230.t01 Wine grape extracellular 52.31 65.33
VIT_02s0025g04310.t01 Wine grape extracellular 51.6 64.44
KRH59832 Soybean extracellular 50.89 64.41
KRH59826 Soybean extracellular 51.25 64.29
VIT_02s0025g04300.t01 Wine grape extracellular 51.25 64.0
GSMUA_Achr6P31500_001 Banana endoplasmic reticulum, extracellular 30.61 63.24
VIT_02s0025g04290.t01 Wine grape extracellular 49.82 62.5
PGSC0003DMT400010892 Potato cytosol 28.47 62.02
Solyc12g056390.1.1 Tomato extracellular 49.11 60.79
PGSC0003DMT400010886 Potato cytosol 48.4 59.91
Os03t0663400-02 Rice extracellular 47.33 59.91
PGSC0003DMT400010887 Potato cytosol, mitochondrion, nucleus 35.23 58.24
KRH27960 Soybean endoplasmic reticulum, extracellular 46.26 58.04
VIT_02s0025g04280.t01 Wine grape extracellular 48.75 57.81
Os12t0629700-01 Rice extracellular 36.65 57.54
KRH77506 Soybean extracellular 45.55 57.4
Os12t0628600-01 Rice extracellular 35.94 57.06
Os12t0629600-00 Rice extracellular 35.94 57.06
Os12t0630100-01 Rice extracellular 36.65 56.59
PGSC0003DMT400010891 Potato cytosol 41.64 54.17
Solyc12g056360.1.1 Tomato extracellular 44.13 54.15
Os12t0630200-01 Rice extracellular 44.84 52.94
CDY41250 Canola extracellular 43.06 52.38
Os12t0629300-00 Rice extracellular 32.38 52.3
Bra013674.1-P Field mustard extracellular 42.7 51.95
Os12t0630500-01 Rice extracellular 47.33 51.55
CDY53136 Canola extracellular 41.28 50.22
Solyc12g056380.1.1 Tomato extracellular 39.86 48.91
PGSC0003DMT400010888 Potato extracellular 23.49 46.81
Solyc12g056370.1.1 Tomato cytosol 29.54 35.47
PGSC0003DMT400010890 Potato extracellular 50.89 33.57
Protein Annotations
Gene3D:2.60.110.10MapMan:35.1UniProt:A0A0P0W1B6ProteinID:BAS85605.1GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR001938InterPro:IPR037176EnsemblPlantsGene:Os03g0661600EnsemblPlants:Os03t0661600-01InterPro:Osmotin/thaumatin-like_sf
PFAM:PF00314PIRSF:PIRSF002703PRINTS:PR00347ScanProsite:PS00316PFscan:PS51367PANTHER:PTHR31048
PANTHER:PTHR31048:SF47SMART:SM00205SUPFAM:SSF49870TMHMM:TMhelixInterPro:ThaumatinInterPro:Thaumatin_CS
UniParc:UPI0003939ADDSEG:seg::::
Description
OsPR5, PR5Similar to Alpha-amylase/trypsin inhibitor (Antifungal protein). (Os03t0661600-01)
Coordinates
chr3:-:25972352..25973470
Molecular Weight (calculated)
29454.8 Da
IEP (calculated)
8.531
GRAVY (calculated)
-0.122
Length
281 amino acids
Sequence
(BLAST)
001: VVHVGNAKSR DAIALHPTLQ ISTRSLARSL PTSKFKQQSR PLLTKKTKAM APSLATSSTL ALFLLVAVSI ADAATFAITN RCQYTVWPAA VPSGGGTKLD
101: PGQTWTINVP AGTTGGRVWA RTGCGFDGSG NGQCQTGDCG GKLRCTAYGA APNTLAEFAL NQWNNLDFFD ISLIDGFNVP MAFLPAGSGA GCPKGGPRCA
201: TAITPQCPSE LRAPGGCNNA CTVFRQDRYC CTGSAANSCG PTNYSEFFKR LCPDAYSYPK DDASSTYTCP AGTNYQVVFC P
Best Arabidopsis Sequence Match ( AT4G11650.1 )
(BLAST)
001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
Arabidopsis Description
OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.