Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0025g04300.t01 | Wine grape | extracellular | 87.34 | 92.0 |
| VIT_02s0025g04310.t01 | Wine grape | extracellular | 86.08 | 90.67 |
| VIT_02s0025g04260.t01 | Wine grape | extracellular | 61.6 | 83.91 |
| VIT_02s0025g04230.t01 | Wine grape | extracellular | 77.64 | 81.78 |
| VIT_02s0025g04270.t01 | Wine grape | extracellular | 77.22 | 81.33 |
| VIT_02s0025g04250.t01 | Wine grape | extracellular | 75.53 | 79.56 |
| VIT_02s0025g04290.t01 | Wine grape | extracellular | 72.15 | 76.34 |
| KRH59832 | Soybean | extracellular | 70.89 | 75.68 |
| GSMUA_Achr6P31500_001 | Banana | endoplasmic reticulum, extracellular | 40.93 | 71.32 |
| KRH59826 | Soybean | extracellular | 67.09 | 70.98 |
| GSMUA_Achr6P31470_001 | Banana | endoplasmic reticulum, extracellular | 55.27 | 70.81 |
| GSMUA_Achr7P16510_001 | Banana | endoplasmic reticulum, extracellular | 51.9 | 67.58 |
| GSMUA_Achr4P31970_001 | Banana | extracellular | 49.79 | 66.67 |
| VIT_02s0025g04330.t01 | Wine grape | extracellular | 62.03 | 66.22 |
| VIT_02s0025g04320.t01 | Wine grape | cytosol | 25.74 | 64.89 |
| Os03t0663500-00 | Rice | extracellular | 59.92 | 64.84 |
| OQU91235 | Sorghum | extracellular | 61.6 | 63.2 |
| Zm00001d033455_P001 | Maize | extracellular | 59.92 | 61.74 |
| KRH77506 | Soybean | extracellular | 57.38 | 60.99 |
| KRH27960 | Soybean | endoplasmic reticulum, extracellular | 57.38 | 60.71 |
| TraesCS4B01G017300.1 | Wheat | cytosol, mitochondrion | 44.3 | 60.69 |
| HORVU4Hr1G002640.1 | Barley | cytosol | 24.89 | 60.2 |
| TraesCS4A01G296300.1 | Wheat | extracellular, unclear | 56.96 | 58.95 |
| TraesCS4D01G015800.1 | Wheat | unclear | 57.81 | 58.8 |
| TraesCS4D01G015600.1 | Wheat | extracellular | 56.96 | 57.45 |
| VIT_02s0025g04340.t01 | Wine grape | endoplasmic reticulum, extracellular, plastid | 63.29 | 57.25 |
| TraesCS4A01G296400.1 | Wheat | cytosol | 24.05 | 56.44 |
| Zm00001d021901_P001 | Maize | extracellular | 54.01 | 56.39 |
| GSMUA_Achr9P26190_001 | Banana | extracellular | 48.52 | 56.37 |
| EER99598 | Sorghum | endoplasmic reticulum, extracellular | 55.27 | 56.22 |
| HORVU4Hr1G002650.2 | Barley | extracellular | 56.12 | 52.16 |
| Os03t0661600-01 | Rice | extracellular | 57.81 | 48.75 |
Protein Annotations
| EntrezGene:100246096 | wikigene:100246096 | Gene3D:2.60.110.10 | MapMan:35.1 | EMBL:AM469087 | ProteinID:CAN65933 |
| ProteinID:CAN65933.1 | ProteinID:CCB58389 | ProteinID:CCB58389.1 | UniProt:F6HUG6 | EMBL:FN596251 | InterPro:IPR001938 |
| InterPro:IPR037176 | EntrezGene:LOC100246096 | wikigene:LOC100246096 | InterPro:Osmotin/thaumatin-like_sf | PFAM:PF00314 | PIRSF:PIRSF002703 |
| PRINTS:PR00347 | ScanProsite:PS00316 | PFscan:PS51367 | PANTHER:PTHR31048 | PANTHER:PTHR31048:SF36 | SMART:SM00205 |
| SUPFAM:SSF49870 | SignalP:SignalP-noTM | TMHMM:TMhelix | InterPro:Thaumatin | InterPro:Thaumatin_CS | UniParc:UPI00015CD47A |
| ArrayExpress:VIT_02s0025g04280 | EnsemblPlantsGene:VIT_02s0025g04280 | EnsemblPlants:VIT_02s0025g04280.t01 | unigene:Vvi.25985 | RefSeq:XP_002276431 | RefSeq:XP_002276431.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:+:3799827..3800550
Molecular Weight (calculated)
25308.6 Da
IEP (calculated)
4.877
GRAVY (calculated)
-0.045
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLCKILSIS SFLLTTLFFT SSYAATFNIQ NRCSYTVWAA AIPGGGMRLG SGQSWSLDVK AATTGSRVWG RTDCSFDASG NGKCETGDCG GRLQCKAYGT
101: PPNTLAEFAL NQYSNLDFFD ISLVDGFNVP IAFNPTSNGC TRGISCTADI VGECPAALKT TGGCNNPCTV FKTDEYCCNS GSCNATDFSR FFKTRCPDAY
201: SYPKDDQTST FTCPGGTNYE VIFCPSAVPQ TCVFIIN
101: PPNTLAEFAL NQYSNLDFFD ISLVDGFNVP IAFNPTSNGC TRGISCTADI VGECPAALKT TGGCNNPCTV FKTDEYCCNS GSCNATDFSR FFKTRCPDAY
201: SYPKDDQTST FTCPGGTNYE VIFCPSAVPQ TCVFIIN
001: MANISSIHIL FLVFITSGIA VMATDFTLRN NCPTTVWAGT LAGQGPKLGD GGFELTPGAS RQLTAPAGWS GRFWARTGCN FDASGNGRCV TGDCGGLRCN
101: GGGVPPVTLA EFTLVGDGGK DFYDVSLVDG YNVKLGIRPS GGSGDCKYAG CVSDLNAACP DMLKVMDQNN VVACKSACER FNTDQYCCRG ANDKPETCPP
201: TDYSRIFKNA CPDAYSYAYD DETSTFTCTG ANYEITFCP
101: GGGVPPVTLA EFTLVGDGGK DFYDVSLVDG YNVKLGIRPS GGSGDCKYAG CVSDLNAACP DMLKVMDQNN VVACKSACER FNTDQYCCRG ANDKPETCPP
201: TDYSRIFKNA CPDAYSYAYD DETSTFTCTG ANYEITFCP
Arabidopsis Description
PR5Pathogenesis-related protein 5 [Source:UniProtKB/Swiss-Prot;Acc:P28493]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.