Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G002640.1 | Barley | cytosol | 86.14 | 88.78 |
| PGSC0003DMT400010892 | Potato | cytosol | 58.42 | 45.74 |
| TraesCS4D01G015600.1 | Wheat | extracellular | 94.06 | 40.43 |
| Os03t0663500-00 | Rice | extracellular | 80.2 | 36.99 |
| VIT_02s0025g04260.t01 | Wine grape | extracellular | 62.38 | 36.21 |
| TraesCS4A01G296300.1 | Wheat | extracellular, unclear | 78.22 | 34.5 |
| Zm00001d033455_P001 | Maize | extracellular | 78.22 | 34.35 |
| OQU91235 | Sorghum | extracellular | 78.22 | 34.2 |
| PGSC0003DMT400010887 | Potato | cytosol, mitochondrion, nucleus | 56.44 | 33.53 |
| KRH59832 | Soybean | extracellular | 62.38 | 28.38 |
| KRH59826 | Soybean | extracellular | 62.38 | 28.12 |
| VIT_02s0025g04270.t01 | Wine grape | extracellular | 62.38 | 28.0 |
| VIT_02s0025g04250.t01 | Wine grape | extracellular | 61.39 | 27.56 |
| VIT_02s0025g04230.t01 | Wine grape | extracellular | 61.39 | 27.56 |
| Solyc12g056390.1.1 | Tomato | extracellular | 61.39 | 27.31 |
| PGSC0003DMT400010886 | Potato | cytosol | 60.4 | 26.87 |
| VIT_02s0025g04290.t01 | Wine grape | extracellular | 59.41 | 26.79 |
| GSMUA_Achr6P31500_001 | Banana | endoplasmic reticulum, extracellular | 35.64 | 26.47 |
| TraesCS5A01G017900.1 | Wheat | golgi | 58.42 | 26.22 |
| PGSC0003DMT400010891 | Potato | cytosol | 55.45 | 25.93 |
| VIT_02s0025g04310.t01 | Wine grape | extracellular | 57.43 | 25.78 |
| VIT_02s0025g04300.t01 | Wine grape | extracellular | 56.44 | 25.33 |
| Solyc12g056360.1.1 | Tomato | extracellular | 57.43 | 25.33 |
| KRH77506 | Soybean | extracellular | 54.46 | 24.66 |
| KRH27960 | Soybean | endoplasmic reticulum, extracellular | 54.46 | 24.55 |
| Solyc12g056380.1.1 | Tomato | extracellular | 55.45 | 24.45 |
| TraesCS5A01G018000.1 | Wheat | extracellular | 56.44 | 24.26 |
| VIT_02s0025g04280.t01 | Wine grape | extracellular | 56.44 | 24.05 |
| TraesCS5A01G018100.1 | Wheat | unclear | 53.47 | 24.0 |
| TraesCS5A01G018400.1 | Wheat | extracellular | 46.53 | 23.5 |
| CDY41250 | Canola | extracellular | 52.48 | 22.94 |
| CDY53136 | Canola | extracellular | 52.48 | 22.94 |
| Bra013674.1-P | Field mustard | extracellular | 52.48 | 22.94 |
| GSMUA_Achr6P31470_001 | Banana | endoplasmic reticulum, extracellular | 38.61 | 21.08 |
| Solyc12g056370.1.1 | Tomato | cytosol | 41.58 | 17.95 |
| PGSC0003DMT400010890 | Potato | extracellular | 65.35 | 15.49 |
| TraesCS5A01G018300.1 | Wheat | extracellular | 21.78 | 12.87 |
| TraesCS7A01G558500.1 | Wheat | extracellular | 19.8 | 11.56 |
| TraesCS5A01G018200.1 | Wheat | endoplasmic reticulum, extracellular | 18.81 | 11.11 |
| TraesCS4A01G498000.1 | Wheat | extracellular | 18.81 | 10.8 |
| TraesCS2A01G110300.1 | Wheat | extracellular | 18.81 | 10.8 |
| TraesCS5A01G018500.1 | Wheat | extracellular | 18.81 | 10.56 |
| TraesCS3A01G226300.1 | Wheat | endoplasmic reticulum, extracellular | 18.81 | 10.33 |
| PGSC0003DMT400010888 | Potato | extracellular | 7.92 | 5.67 |
| TraesCS5A01G019500.1 | Wheat | endoplasmic reticulum, extracellular | 8.91 | 4.89 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G296400.1 | EnsemblPlantsGene:TraesCS4A01G296400 | Gene3D:2.60.110.10 | InterPro:IPR001938 | InterPro:IPR037176 | InterPro:Osmotin/thaumatin-like_sf |
| InterPro:Thaumatin | PANTHER:PTHR31048 | PANTHER:PTHR31048:SF47 | PFAM:PF00314 | PFscan:PS51367 | PIRSF:PIRSF002703 |
| SMART:SM00205 | SUPFAM:SSF49870 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr4A:-:596537351..596537656
Molecular Weight (calculated)
10556.1 Da
IEP (calculated)
4.266
GRAVY (calculated)
-0.427
Length
101 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFLPADGTA GCAKGGSRCD ADITSQCLSE LRAPGGGNNA CTVFKKDEYC CTGTAADNCG PTDYSKFFKG QCPDAYSYPK DDASSTFTCP GGTNYQVVFC
101: P
101: P
001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
Arabidopsis Description
OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.