Factsheet for HORVU4Hr1G002640.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G296400.1	Wheat	cytosol	88.78	86.14
HORVU5Hr1G051960.1	Barley	cytosol	31.63	45.59
TraesCS4D01G015600.1	Wheat	extracellular	88.78	37.02
VIT_02s0025g04260.t01	Wine grape	extracellular	64.29	36.21
Os03t0663500-00	Rice	extracellular	80.61	36.07
Zm00001d033455_P001	Maize	extracellular	80.61	34.35
OQU91235	Sorghum	extracellular	80.61	34.2
HORVU5Hr1G005310.1	Barley	cytosol	44.9	33.08
HORVU4Hr1G002650.2	Barley	extracellular	77.55	29.8
KRH59832	Soybean	extracellular	66.33	29.28
KRH59826	Soybean	extracellular	66.33	29.02
VIT_02s0025g04230.t01	Wine grape	extracellular	65.31	28.44
VIT_02s0025g04270.t01	Wine grape	extracellular	64.29	28.0
VIT_02s0025g04250.t01	Wine grape	extracellular	63.27	27.56
VIT_02s0025g04310.t01	Wine grape	extracellular	61.22	26.67
VIT_02s0025g04290.t01	Wine grape	extracellular	60.2	26.34
VIT_02s0025g04300.t01	Wine grape	extracellular	60.2	26.22
GSMUA_Achr6P31500_001	Banana	endoplasmic reticulum, extracellular	35.71	25.74
VIT_02s0025g04280.t01	Wine grape	extracellular	60.2	24.89
HORVU5Hr1G005190.1	Barley	extracellular	56.12	24.34
KRH77506	Soybean	extracellular	55.1	24.22
KRH27960	Soybean	endoplasmic reticulum, extracellular	55.1	24.11
HORVU5Hr1G051970.4	Barley	extracellular	59.18	23.67
HORVU5Hr1G005240.1	Barley	plastid	58.16	23.08
GSMUA_Achr6P31470_001	Banana	endoplasmic reticulum, extracellular	37.76	20.0
HORVU5Hr1G005180.1	Barley	extracellular	59.18	19.33
HORVU5Hr1G005300.1	Barley	extracellular	23.47	13.45
HORVU7Hr1G122120.1	Barley	extracellular	21.43	12.14
HORVU3Hr1G056430.1	Barley	endoplasmic reticulum, extracellular	21.43	11.41
HORVU5Hr1G005290.1	Barley	extracellular, plastid	19.39	8.3
HORVU5Hr1G051950.1	Barley	extracellular	5.1	2.67
HORVU5Hr1G005510.1	Barley	extracellular, mitochondrion, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU4Hr1G002640.1	EnsemblPlantsGene:HORVU4Hr1G002640	Gene3D:2.60.110.10	InterPro:IPR001938	InterPro:IPR037176	InterPro:Osmotin/thaumatin-like_sf
InterPro:Thaumatin	PANTHER:PTHR31048	PANTHER:PTHR31048:SF47	PFAM:PF00314	PFscan:PS51367	PIRSF:PIRSF002703
SMART:SM00205	SUPFAM:SSF49870	UniParc:UPI000B46F4A6	UniProt:A0A287MXM3	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr4H:+:5066553..5067560

Molecular Weight (calculated)

10435.1 Da

IEP (calculated)

4.266

GRAVY (calculated)

-0.386

Length

98 amino acids

Sequence
(BLAST)

1: MDFLPADGCV KGGPRCDVDI TALCPSELQA RGGCNNACTV FKKDEYCCTG SAADNCGPTD YSKFFKGQCP DAYSYPKDDP SSTFTCPGGT NYQVVFCP

Best Arabidopsis Sequence Match ( AT4G11650.1 )
(BLAST)

001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN

Arabidopsis Description

OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.