Factsheet for VIT_02s0025g04290.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g04260.t01	Wine grape	extracellular	62.95	81.03
VIT_02s0025g04270.t01	Wine grape	extracellular	79.91	79.56
VIT_02s0025g04300.t01	Wine grape	extracellular	79.02	78.67
VIT_02s0025g04230.t01	Wine grape	extracellular	79.02	78.67
VIT_02s0025g04250.t01	Wine grape	extracellular	78.57	78.22
VIT_02s0025g04310.t01	Wine grape	extracellular	77.68	77.33
VIT_02s0025g04280.t01	Wine grape	extracellular	76.34	72.15
GSMUA_Achr7P16510_001	Banana	endoplasmic reticulum, extracellular	56.25	69.23
KRH59832	Soybean	extracellular	68.3	68.92
VIT_02s0025g04330.t01	Wine grape	extracellular	67.86	68.47
GSMUA_Achr4P31970_001	Banana	extracellular	54.02	68.36
VIT_02s0025g04320.t01	Wine grape	cytosol	28.57	68.09
KRH59826	Soybean	extracellular	67.41	67.41
GSMUA_Achr6P31470_001	Banana	endoplasmic reticulum, extracellular	54.91	66.49
Os03t0663500-00	Rice	extracellular	64.29	65.75
GSMUA_Achr6P31500_001	Banana	endoplasmic reticulum, extracellular	37.95	62.5
Zm00001d033455_P001	Maize	extracellular	62.5	60.87
TraesCS4B01G017300.1	Wheat	cytosol, mitochondrion	46.88	60.69
HORVU4Hr1G002640.1	Barley	cytosol	26.34	60.2
OQU91235	Sorghum	extracellular	62.05	60.17
KRH77506	Soybean	extracellular	59.38	59.64
TraesCS4A01G296400.1	Wheat	cytosol	26.79	59.41
TraesCS4A01G296300.1	Wheat	extracellular, unclear	59.82	58.52
KRH27960	Soybean	endoplasmic reticulum, extracellular	58.48	58.48
TraesCS4D01G015600.1	Wheat	extracellular	61.16	58.3
TraesCS4D01G015800.1	Wheat	unclear	60.27	57.94
Zm00001d021901_P001	Maize	extracellular	57.59	56.83
EER99598	Sorghum	endoplasmic reticulum, extracellular	58.48	56.22
VIT_02s0025g04340.t01	Wine grape	endoplasmic reticulum, extracellular, plastid	64.73	55.34
GSMUA_Achr9P26190_001	Banana	extracellular	49.55	54.41
HORVU4Hr1G002650.2	Barley	extracellular	58.04	50.98
Os03t0661600-01	Rice	extracellular	62.5	49.82

Protein Annotations

EntrezGene:100265026	wikigene:100265026	Gene3D:2.60.110.10	MapMan:35.1	UniProt:A5C9F2	EMBL:AM486918
ProteinID:CAN66516	ProteinID:CAN66516.1	ProteinID:CCB58390	ProteinID:CCB58390.1	EMBL:FN596251	InterPro:IPR001938
InterPro:IPR037176	EntrezGene:LOC100265026	wikigene:LOC100265026	InterPro:Osmotin/thaumatin-like_sf	PFAM:PF00314	PIRSF:PIRSF002703
PRINTS:PR00347	PFscan:PS51257	PFscan:PS51367	PANTHER:PTHR31048	PANTHER:PTHR31048:SF36	SMART:SM00205
SUPFAM:SSF49870	SignalP:SignalP-noTM	TIGR:TC64228	InterPro:Thaumatin	UniParc:UPI000152268B	ArrayExpress:VIT_02s0025g04290
EnsemblPlantsGene:VIT_02s0025g04290	EnsemblPlants:VIT_02s0025g04290.t01	RefSeq:XP_002282993	RefSeq:XP_002282993.1	SEG:seg	:

Description

No Description!

Coordinates

chr2:+:3804712..3808936

Molecular Weight (calculated)

24064.1 Da

IEP (calculated)

4.631

GRAVY (calculated)

-0.194

Length

224 amino acids

Sequence
(BLAST)

001: MGLFKTPLIS SFLLTTLFFA SCHAATLINI QNHCSYTVWA AAVPGGGRQL GPGQSWSLDA NPGTARVWAR TNCTFDGSGN GTCETRDCGG RLQCQAYGTP
101: PNTLAEFALN QFNNMDFFDI SLVDGFNVPM ALNSTSNGCT RGIQCSADIV GQCPDELRAP GGCNNPCTVF RTDEYCCYSG NCGPTTYSKF FKDRCPVAYS
201: NPNDDQTSTF TCPGGTNYDV IFCP

Best Arabidopsis Sequence Match ( AT1G75030.1 )
(BLAST)

001: MAKISSIHIL FFVFITSGIA DSATVFTLQN SCAYTVWPGT LSGNSITLGD GGFPLTPGAS VQLTAPTGWS GRFWARTGCN FDASGHGTCV TGDCGGVLKC
101: TGGGVPPATL AEFTVGSSNA GMDFYDVSLV DGYNVKMGIK PQGGFGNCKY AGCVSDINEI CPSELRIMDP NSGSVAACKS ACAAFSSPEF CCTGAHATPQ
201: TCSPTYYSSM FKNACPSAYS YAYDDASSTF TCTGSNYLIT FCPTQS

Arabidopsis Description

ATLP-3At1g75030 [Source:UniProtKB/TrEMBL;Acc:Q9C9P9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.