Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 3
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- nucleus 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400010892 | Potato | cytosol | 68.09 | 49.61 |
HORVU5Hr1G051960.1 | Barley | cytosol | 29.79 | 41.18 |
VIT_02s0025g04260.t01 | Wine grape | extracellular | 70.21 | 37.93 |
PGSC0003DMT400010887 | Potato | cytosol, mitochondrion, nucleus | 67.02 | 37.06 |
VIT_02s0025g04330.t01 | Wine grape | extracellular | 71.28 | 30.18 |
PGSC0003DMT400010891 | Potato | cytosol | 67.02 | 29.17 |
VIT_02s0025g04250.t01 | Wine grape | extracellular | 69.15 | 28.89 |
VIT_02s0025g04270.t01 | Wine grape | extracellular | 69.15 | 28.89 |
VIT_02s0025g04300.t01 | Wine grape | extracellular | 69.15 | 28.89 |
VIT_02s0025g04290.t01 | Wine grape | extracellular | 68.09 | 28.57 |
VIT_02s0025g04230.t01 | Wine grape | extracellular | 68.09 | 28.44 |
VIT_02s0025g04310.t01 | Wine grape | extracellular | 68.09 | 28.44 |
Solyc12g056360.1.1 | Tomato | extracellular | 69.15 | 28.38 |
Solyc12g056380.1.1 | Tomato | extracellular | 63.83 | 26.2 |
VIT_02s0025g04280.t01 | Wine grape | extracellular | 64.89 | 25.74 |
VIT_02s0025g04340.t01 | Wine grape | endoplasmic reticulum, extracellular, plastid | 71.28 | 25.57 |
Protein Annotations
ArrayExpress:VIT_02s0025g04320 | EMBL:FN596251 | EnsemblPlants:VIT_02s0025g04320.t01 | EnsemblPlantsGene:VIT_02s0025g04320 | Gene3D:2.60.110.10 | InterPro:IPR001938 |
InterPro:IPR037176 | InterPro:Osmotin/thaumatin-like_sf | InterPro:Thaumatin | PANTHER:PTHR31048 | PANTHER:PTHR31048:SF36 | PFAM:PF00314 |
PFscan:PS51367 | PIRSF:PIRSF002703 | ProteinID:CCB58393 | ProteinID:CCB58393.1 | RefSeq:XP_002276390 | RefSeq:XP_002276390.1 |
SMART:SM00205 | SUPFAM:SSF49870 | UniParc:UPI00021085E0 | UniProt:F6HUH0 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr2:+:3816872..3817375
Molecular Weight (calculated)
10160.5 Da
IEP (calculated)
4.092
GRAVY (calculated)
-0.640
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MEFSPTSDGC RGANCTGDIN GPCPNELRDP GGCNNPCTVF KNSQYCCDSG SCGPTTYSEF FKDRCPNAYS YPEDDSTSLF TCSTGSNYRV VFCP
001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
Arabidopsis Description
OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.