Factsheet for PGSC0003DMT400010892

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 3
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g04320.t01	Wine grape	cytosol	49.61	68.09
PGSC0003DMT400010887	Potato	cytosol, mitochondrion, nucleus	79.07	60.0
TraesCS4A01G296400.1	Wheat	cytosol	45.74	58.42
Solyc12g056360.1.1	Tomato	extracellular	87.6	49.34
PGSC0003DMT400010891	Potato	cytosol	82.17	49.07
TraesCS4B01G017300.1	Wheat	cytosol, mitochondrion	59.69	44.51
KRH59832	Soybean	extracellular	69.77	40.54
KRH59826	Soybean	extracellular	69.77	40.18
PGSC0003DMT400010886	Potato	cytosol	68.99	39.21
GSMUA_Achr6P31500_001	Banana	endoplasmic reticulum, extracellular	41.09	38.97
Os03t0663500-00	Rice	extracellular	65.89	38.81
PGSC0003DMT400007865	Potato	extracellular	65.12	37.17
Zm00001d033455_P001	Maize	extracellular	62.79	35.22
OQU91235	Sorghum	extracellular	62.79	35.06
Zm00001d021901_P001	Maize	extracellular	61.24	34.8
KRH27960	Soybean	endoplasmic reticulum, extracellular	59.69	34.38
TraesCS4A01G296300.1	Wheat	extracellular, unclear	60.47	34.06
TraesCS4D01G015600.1	Wheat	extracellular	62.02	34.04
PGSC0003DMT400007870	Potato	extracellular	64.34	33.74
KRH77506	Soybean	extracellular	58.14	33.63
PGSC0003DMT400007869	Potato	cytosol	64.34	33.6
GSMUA_Achr7P16510_001	Banana	endoplasmic reticulum, extracellular	47.29	33.52
EER99598	Sorghum	endoplasmic reticulum, extracellular	60.47	33.48
TraesCS4D01G015800.1	Wheat	unclear	60.47	33.48
PGSC0003DMT400034395	Potato	extracellular	55.04	32.87
PGSC0003DMT400007868	Potato	extracellular	62.79	32.79
GSMUA_Achr4P31970_001	Banana	extracellular	44.19	32.2
GSMUA_Achr6P31470_001	Banana	endoplasmic reticulum, extracellular	45.74	31.89
PGSC0003DMT400007906	Potato	extracellular	60.47	31.2
PGSC0003DMT400007905	Potato	extracellular	60.47	31.2
Os03t0661600-01	Rice	extracellular	62.02	28.47
PGSC0003DMT400010888	Potato	extracellular	27.91	25.53
GSMUA_Achr9P26190_001	Banana	extracellular	40.31	25.49
PGSC0003DMT400010890	Potato	extracellular	68.99	20.89
PGSC0003DMT400007866	Potato	endoplasmic reticulum, extracellular	11.63	8.24

Protein Annotations

EnsemblPlants:PGSC0003DMT400010892	EnsemblPlantsGene:PGSC0003DMG400004264	Gene3D:2.60.110.10	InterPro:IPR001938	InterPro:IPR037176	InterPro:Osmotin/thaumatin-like_sf
InterPro:Thaumatin	PANTHER:PTHR31048	PANTHER:PTHR31048:SF36	PFAM:PF00314	PFscan:PS51367	PGSC:PGSC0003DMG400004264
PIRSF:PIRSF002703	PRINTS:PR00347	SMART:SM00205	SUPFAM:SSF49870	UniParc:UPI000295653A	UniProt:M0ZYQ1
MapMan:35.1	:	:	:	:	:

Description

Thaumatin [Source:PGSC_GENE;Acc:PGSC0003DMG400004264]

Coordinates

chr12:+:54192045..54192852

Molecular Weight (calculated)

14224.6 Da

IEP (calculated)

4.127

GRAVY (calculated)

-0.190

Length

129 amino acids

Sequence
(BLAST)

001: MDYSPVTLAE YALNQFNNND FLDISLVDGF NIPMEFSPAS ADECSVRIRC TADIIGQCPN ELRTPGGCNN PCTVFKTAEY CCTSVTCGPT NYSRFFKDRC
101: STSYSYPMDD STSTFLCPGG TSYKVVFCP

Best Arabidopsis Sequence Match ( AT4G11650.1 )
(BLAST)

001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN

Arabidopsis Description

OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.