Factsheet for GSMUA_Achr9P26190_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P31470_001	Banana	endoplasmic reticulum, extracellular	65.2	71.89
GSMUA_Achr7P16510_001	Banana	endoplasmic reticulum, extracellular	60.78	68.13
GSMUA_Achr6P31500_001	Banana	endoplasmic reticulum, extracellular	44.61	66.91
GSMUA_Achr4P31970_001	Banana	extracellular	54.9	63.28
VIT_02s0025g04230.t01	Wine grape	extracellular	61.27	55.56
VIT_02s0025g04270.t01	Wine grape	extracellular	61.27	55.56
VIT_02s0025g04250.t01	Wine grape	extracellular	59.8	54.22
PGSC0003DMT400010888	Potato	extracellular	36.27	52.48
VIT_02s0025g04310.t01	Wine grape	extracellular	57.35	52.0
VIT_02s0025g04300.t01	Wine grape	extracellular	56.86	51.56
KRH59832	Soybean	extracellular	54.41	50.0
PGSC0003DMT400010886	Potato	cytosol	55.39	49.78
VIT_02s0025g04290.t01	Wine grape	extracellular	54.41	49.55
Solyc12g056390.1.1	Tomato	extracellular	54.9	49.34
KRH59826	Soybean	extracellular	53.43	48.66
VIT_02s0025g04280.t01	Wine grape	extracellular	56.37	48.52
VIT_02s0025g04260.t01	Wine grape	extracellular	41.18	48.28
KRH27960	Soybean	endoplasmic reticulum, extracellular	50.0	45.54
KRH77506	Soybean	extracellular	49.51	45.29
Solyc12g056360.1.1	Tomato	extracellular	50.0	44.54
CDY41250	Canola	extracellular	49.51	43.72
Bra013674.1-P	Field mustard	extracellular	49.02	43.29
PGSC0003DMT400010891	Potato	cytosol	44.61	42.13
CDY53136	Canola	extracellular	47.06	41.56
PGSC0003DMT400010892	Potato	cytosol	25.49	40.31
Solyc12g056380.1.1	Tomato	extracellular	45.1	40.17
PGSC0003DMT400010887	Potato	cytosol, mitochondrion, nucleus	33.33	40.0
Solyc12g056370.1.1	Tomato	cytosol	35.78	31.2
PGSC0003DMT400010890	Potato	extracellular	57.84	27.7

Protein Annotations

EnsemblPlants:GSMUA_Achr9P26190_001	EnsemblPlants:GSMUA_Achr9T26190_001	EnsemblPlantsGene:GSMUA_Achr9G26190_001	Gene3D:2.60.110.10	InterPro:IPR001938	InterPro:IPR037176
InterPro:Osmotin/thaumatin-like_sf	InterPro:Thaumatin	InterPro:Thaumatin_CS	PANTHER:PTHR31048	PANTHER:PTHR31048:SF36	PFAM:PF00314
PFscan:PS51367	PIRSF:PIRSF002703	PRINTS:PR00347	ScanProsite:PS00316	SEG:seg	SignalP:SignalP-noTM
SMART:SM00205	SUPFAM:SSF49870	UniParc:UPI00029649CA	UniProt:M0U3M6	MapMan:35.1	:

Description

Thaumatin-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G26190_001]

Coordinates

chr9:+:30691241..30692120

Molecular Weight (calculated)

21938.7 Da

IEP (calculated)

4.337

GRAVY (calculated)

-0.021

Length

204 amino acids

Sequence
(BLAST)

001: MASSTILSFL LFALLLALSR AATFEIVNWC PFTVWAAAVP GGGRQLDRGQ TWVLDVNPGT TGGRIWARTG CSFDGSGSGS CQTGDCGGVL ACQGYGSPPN
101: TLAEFALNQF DNLDFLDVSL VDGFNVPMEF SPITGNCSAI RNCPDAYSYP KDDATSTFTC PGNGDYKVIF CPSDGYPTRF GRTARCRGER EDADFFVHYQ
201: IVQV

Best Arabidopsis Sequence Match ( AT4G11650.1 )
(BLAST)

001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN

Arabidopsis Description

OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.