Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013674.1-P | Field mustard | extracellular | 94.37 | 94.37 |
| CDY41250 | Canola | extracellular | 93.94 | 93.94 |
| PGSC0003DMT400010886 | Potato | cytosol | 60.61 | 61.67 |
| KRH59832 | Soybean | extracellular | 58.87 | 61.26 |
| Solyc12g056390.1.1 | Tomato | extracellular | 60.17 | 61.23 |
| VIT_02s0025g04330.t01 | Wine grape | extracellular | 57.14 | 59.46 |
| KRH59826 | Soybean | extracellular | 56.71 | 58.48 |
| EER99598 | Sorghum | endoplasmic reticulum, extracellular | 58.44 | 57.94 |
| GSMUA_Achr6P31470_001 | Banana | endoplasmic reticulum, extracellular | 46.32 | 57.84 |
| GSMUA_Achr6P31500_001 | Banana | endoplasmic reticulum, extracellular | 33.77 | 57.35 |
| Zm00001d021901_P001 | Maize | extracellular | 56.28 | 57.27 |
| GSMUA_Achr4P31970_001 | Banana | extracellular | 42.86 | 55.93 |
| GSMUA_Achr7P16510_001 | Banana | endoplasmic reticulum, extracellular | 43.72 | 55.49 |
| TraesCS4B01G017300.1 | Wheat | cytosol, mitochondrion | 41.56 | 55.49 |
| KRH27960 | Soybean | endoplasmic reticulum, extracellular | 52.81 | 54.46 |
| OQU91235 | Sorghum | extracellular | 54.11 | 54.11 |
| KRH77506 | Soybean | extracellular | 51.95 | 53.81 |
| Zm00001d033455_P001 | Maize | extracellular | 53.25 | 53.48 |
| CDY25290 | Canola | endoplasmic reticulum, extracellular | 56.28 | 53.28 |
| TraesCS4A01G296300.1 | Wheat | extracellular, unclear | 52.81 | 53.28 |
| Os03t0663500-00 | Rice | extracellular | 50.22 | 52.97 |
| TraesCS4D01G015600.1 | Wheat | extracellular | 53.68 | 52.77 |
| TraesCS4A01G296400.1 | Wheat | cytosol | 22.94 | 52.48 |
| TraesCS4D01G015800.1 | Wheat | unclear | 51.08 | 50.64 |
| GSMUA_Achr9P26190_001 | Banana | extracellular | 41.56 | 47.06 |
| Os03t0661600-01 | Rice | extracellular | 50.22 | 41.28 |
| Solyc12g056370.1.1 | Tomato | cytosol | 35.93 | 35.47 |
| PGSC0003DMT400010890 | Potato | extracellular | 59.74 | 32.39 |
Protein Annotations
| EnsemblPlants:CDY53136 | EnsemblPlantsGene:GSBRNA2T00008668001 | Gene3D:2.60.110.10 | InterPro:IPR001938 | InterPro:IPR037176 | InterPro:Osmotin/thaumatin-like_sf |
| InterPro:Thaumatin | InterPro:Thaumatin_CS | PANTHER:PTHR31048 | PANTHER:PTHR31048:SF36 | PFAM:PF00314 | PFscan:PS51367 |
| PIRSF:PIRSF002703 | PRINTS:PR00347 | ProteinID:CDY53136 | ProteinID:CDY53136.1 | ScanProsite:PS00316 | SMART:SM00205 |
| SUPFAM:SSF49870 | TMHMM:TMhelix | UniParc:UPI0004EEECA7 | UniProt:A0A078ITL7 | MapMan:35.1 | : |
Description
BnaC01g41460DBnaC01g41460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ITL7]
Coordinates
chrLK033169:+:67918..69092
Molecular Weight (calculated)
25219.9 Da
IEP (calculated)
6.821
GRAVY (calculated)
-0.171
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MIYQKTLLTV FFFAFITIYF VILADATTFT VRNNCPYVVW AATSAPGKPG GGKRLNQGET WIVTGDPGTT QARIWGRTNC NFDVSGRGGC QTGDCNGVLE
101: CKSYGRAPNT LAEYSLKQYA DQDFIDISVI DGFNIPMEFS SASGQCTRKI RCTGDIIAQC PAQLRMDGAC NGPCPVLKTE EHCCNSGNCG PTPLSMFFKQ
201: RCPDAYSYPK DDPTSLFTCP SGTNYNVIFC P
101: CKSYGRAPNT LAEYSLKQYA DQDFIDISVI DGFNIPMEFS SASGQCTRKI RCTGDIIAQC PAQLRMDGAC NGPCPVLKTE EHCCNSGNCG PTPLSMFFKQ
201: RCPDAYSYPK DDPTSLFTCP SGTNYNVIFC P
001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
Arabidopsis Description
OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.