Factsheet for Zm00001d021901_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 16602704
extracellular: 18088330
extracellular: 20408568
extracellular: 22192489

msms PMID: 22192489 doi

K Witzel, M Shahzad, A Matros, HP Mock, KH Mühling

Institute of Plant Nutrition and Soil Science, Christian Albrechts University, Hermann-Rodewald-Strasse 2, 24118 Kiel, Germany. khmuehling@plantnutrition.uni-kiel.de.

msms PMID: 18088330 doi

S Alvarez, EL Marsh, SG Schroeder, DP Schachtman

Donald Danforth Plant Science Center, 975 North Warson Rd, St Louis, MO, 63132, USA.

msms PMID: 16602704 doi

S Alvarez, JQ Goodger, EL Marsh, S Chen, VS Asirvatham, DP Schachtman

Donald Danforth Plant Science Center, 975 North Warson Road, Saint Louis, Missouri 63132, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99598	Sorghum	endoplasmic reticulum, extracellular	89.87	87.55
GSMUA_Achr6P31470_001	Banana	endoplasmic reticulum, extracellular	55.51	68.11
Zm00001d033455_P001	Maize	extracellular	64.76	63.91
VIT_02s0025g04270.t01	Wine grape	extracellular	63.0	63.56
VIT_02s0025g04230.t01	Wine grape	extracellular	62.56	63.11
KRH59832	Soybean	extracellular	61.23	62.61
GSMUA_Achr6P31500_001	Banana	endoplasmic reticulum, extracellular	37.44	62.5
VIT_02s0025g04250.t01	Wine grape	extracellular	61.67	62.22
KRH59826	Soybean	extracellular	61.23	62.05
VIT_02s0025g04310.t01	Wine grape	extracellular	60.79	61.33
PGSC0003DMT400010892	Potato	cytosol	34.8	61.24
VIT_02s0025g04260.t01	Wine grape	extracellular	46.7	60.92
Bra013674.1-P	Field mustard	extracellular	60.79	59.74
VIT_02s0025g04300.t01	Wine grape	extracellular	58.59	59.11
CDY41250	Canola	extracellular	59.47	58.44
VIT_02s0025g04290.t01	Wine grape	extracellular	56.83	57.59
Solyc12g056390.1.1	Tomato	extracellular	57.27	57.27
PGSC0003DMT400010886	Potato	cytosol	56.83	56.83
CDY53136	Canola	extracellular	57.27	56.28
Zm00001d043121_P001	Maize	extracellular	54.19	55.91
PGSC0003DMT400010887	Potato	cytosol, mitochondrion, nucleus	41.41	55.29
KRH77506	Soybean	extracellular	53.74	54.71
VIT_02s0025g04280.t01	Wine grape	extracellular	56.39	54.01
Solyc12g056360.1.1	Tomato	extracellular	54.19	53.71
KRH27960	Soybean	endoplasmic reticulum, extracellular	52.42	53.12
PGSC0003DMT400010891	Potato	cytosol	50.22	52.78
Zm00001d031152_P001	Maize	extracellular	38.33	50.88
Solyc12g056380.1.1	Tomato	extracellular	49.78	49.34
Zm00001d031155_P001	Maize	extracellular	38.33	49.15
Zm00001d031157_P001	Maize	extracellular	38.33	49.15
Zm00001d031158_P001	Maize	extracellular	37.44	48.85
Zm00001d013610_P001	Maize	extracellular	47.14	48.64
PGSC0003DMT400010888	Potato	extracellular	29.52	47.52
Solyc12g056370.1.1	Tomato	cytosol	35.68	34.62
PGSC0003DMT400010890	Potato	extracellular	57.27	30.52

Protein Annotations

PDB:1DU5	Gene3D:2.60.110.10	MapMan:35.1	EntrezGene:542299	EMBL:BT064401	UniProt:C0P7Y2
GO:GO:0003674	GO:GO:0004867	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0008152
GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0010466	GO:GO:0010951	GO:GO:0019538
GO:GO:0030234	GO:GO:0030414	GO:GO:0031640	GO:GO:0040007	GO:GO:0044130	GO:GO:0050832
GO:GO:0051841	InterPro:IPR001938	InterPro:IPR037176	ProteinID:ONM59026.1	InterPro:Osmotin/thaumatin-like_sf	UniProt:P33679
PFAM:PF00314	PIRSF:PIRSF002703	PRINTS:PR00347	ScanProsite:PS00316	PFscan:PS51367	PANTHER:PTHR31048
PANTHER:PTHR31048:SF47	SMART:SM00205	SUPFAM:SSF49870	SignalP:SignalP-noTM	TMHMM:TMhelix	InterPro:Thaumatin
InterPro:Thaumatin_CS	EMBL:U06831	UniParc:UPI000013C39A	EnsemblPlantsGene:Zm00001d021901	EnsemblPlants:Zm00001d021901_P001	EnsemblPlants:Zm00001d021901_T001
SEG:seg	:	:	:	:	:

Description

stress-induced protein1 stress-induced protein1

Coordinates

chr7:-:165699754..165700437

Molecular Weight (calculated)

24000.3 Da

IEP (calculated)

7.640

GRAVY (calculated)

-0.031

Length

227 amino acids

Sequence
(BLAST)

001: MAGSVAIVGI FVALLAVAGE AAVFTVVNQC PFTVWAASVP VGGGRQLNRG ESWRITAPAG TTAARIWART GCKFDASGRG SCRTGDCGGV LQCTGYGRAP
101: NTLAEYALKQ FNNLDFFDIS LIDGFNVPMS FLPDGGSGCS RGPRCAVDVN ARCPAELRQD GVCNNACPVF KKDEYCCVGS AANDCHPTNY SRYFKGQCPD
201: AYSYPKDDAT STFTCPAGTN YKVVFCP

Best Arabidopsis Sequence Match ( AT4G11650.1 )
(BLAST)

001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN

Arabidopsis Description

OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.