Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- vacuole 2
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400010892 | Potato | cytosol | 60.0 | 79.07 |
| VIT_02s0025g04320.t01 | Wine grape | cytosol | 37.06 | 67.02 |
| Solyc12g056380.1.1 | Tomato | extracellular | 87.06 | 64.63 |
| PGSC0003DMT400010891 | Potato | cytosol | 81.76 | 64.35 |
| TraesCS4A01G296400.1 | Wheat | cytosol | 33.53 | 56.44 |
| TraesCS4B01G017300.1 | Wheat | cytosol, mitochondrion | 56.47 | 55.49 |
| KRH59832 | Soybean | extracellular | 64.12 | 49.1 |
| PGSC0003DMT400010886 | Potato | cytosol | 65.29 | 48.9 |
| KRH59826 | Soybean | extracellular | 63.53 | 48.21 |
| Os03t0663500-00 | Rice | extracellular | 59.41 | 46.12 |
| KRH27960 | Soybean | endoplasmic reticulum, extracellular | 60.59 | 45.98 |
| PGSC0003DMT400007865 | Potato | extracellular | 60.59 | 45.58 |
| GSMUA_Achr6P31500_001 | Banana | endoplasmic reticulum, extracellular | 35.88 | 44.85 |
| KRH77506 | Soybean | extracellular | 58.82 | 44.84 |
| PGSC0003DMT400010888 | Potato | extracellular | 37.06 | 44.68 |
| GSMUA_Achr4P31970_001 | Banana | extracellular | 45.88 | 44.07 |
| PGSC0003DMT400034395 | Potato | extracellular | 55.88 | 43.98 |
| GSMUA_Achr7P16510_001 | Banana | endoplasmic reticulum, extracellular | 47.06 | 43.96 |
| OQU91235 | Sorghum | extracellular | 57.65 | 42.42 |
| GSMUA_Achr6P31470_001 | Banana | endoplasmic reticulum, extracellular | 45.88 | 42.16 |
| PGSC0003DMT400007870 | Potato | extracellular | 60.59 | 41.87 |
| TraesCS4D01G015600.1 | Wheat | extracellular | 57.65 | 41.7 |
| TraesCS4A01G296300.1 | Wheat | extracellular, unclear | 55.88 | 41.48 |
| Zm00001d021901_P001 | Maize | extracellular | 55.29 | 41.41 |
| Zm00001d033455_P001 | Maize | extracellular | 55.88 | 41.3 |
| TraesCS4D01G015800.1 | Wheat | unclear | 55.29 | 40.34 |
| EER99598 | Sorghum | endoplasmic reticulum, extracellular | 54.71 | 39.91 |
| PGSC0003DMT400007869 | Potato | cytosol | 57.65 | 39.68 |
| PGSC0003DMT400007868 | Potato | extracellular | 57.65 | 39.68 |
| PGSC0003DMT400007906 | Potato | extracellular | 57.65 | 39.2 |
| PGSC0003DMT400007905 | Potato | extracellular | 57.06 | 38.8 |
| Os03t0661600-01 | Rice | extracellular | 58.24 | 35.23 |
| GSMUA_Achr9P26190_001 | Banana | extracellular | 40.0 | 33.33 |
| PGSC0003DMT400010890 | Potato | extracellular | 65.88 | 26.29 |
| PGSC0003DMT400007866 | Potato | endoplasmic reticulum, extracellular | 15.29 | 14.29 |
Protein Annotations
| EMBL:AY737316 | EnsemblPlants:PGSC0003DMT400010887 | EnsemblPlantsGene:PGSC0003DMG400004260 | Gene3D:2.60.110.10 | InterPro:IPR001938 | InterPro:IPR037176 |
| InterPro:Osmotin/thaumatin-like_sf | InterPro:Thaumatin | PANTHER:PTHR31048 | PANTHER:PTHR31048:SF36 | PFAM:PF00314 | PFscan:PS51367 |
| PGSC:PGSC0003DMG400004260 | PIRSF:PIRSF002703 | PRINTS:PR00347 | ProteinID:AAU95245 | ProteinID:AAU95245.1 | SMART:SM00205 |
| SUPFAM:SSF49870 | UniParc:UPI00029598AB | UniProt:M0ZYP7 | MapMan:35.1 | : | : |
Description
Thaumatin [Source:PGSC_GENE;Acc:PGSC0003DMG400004260]
Coordinates
chr12:+:54231188..54232163
Molecular Weight (calculated)
18779.7 Da
IEP (calculated)
4.514
GRAVY (calculated)
-0.444
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTSSTKKGR IWGRTNCNFD SLGHSQCQTG DCNGLLECQT FSNTPPNTLA ENALNQYNNN DFFDLSLVEG FNVPMEFSPV FADECSTRIR CTADIIGQCP
101: NELRTPGGCN NPCTIFKTDE YCCTSGNCGP TNYSRFFKDR CSTSFSYPAD DLSSLFTCPS GTTYRVVFCP
101: NELRTPGGCN NPCTIFKTDE YCCTSGNCGP TNYSRFFKDR CSTSFSYPAD DLSSLFTCPS GTTYRVVFCP
001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
Arabidopsis Description
OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.