Factsheet for PGSC0003DMT400007868

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400007870	Potato	extracellular	91.5	91.87
PGSC0003DMT400007869	Potato	cytosol	90.28	90.28
Solyc08g080620.1.1	Tomato	extracellular	82.59	90.27
PGSC0003DMT400007865	Potato	extracellular	82.59	90.27
PGSC0003DMT400034395	Potato	extracellular	73.68	84.26
PGSC0003DMT400007906	Potato	extracellular	77.33	76.4
PGSC0003DMT400007905	Potato	extracellular	74.9	74.0
AT4G11650.1	Thale cress	endoplasmic reticulum, extracellular	63.16	63.93
PGSC0003DMT400010886	Potato	cytosol	58.3	63.44
PGSC0003DMT400010892	Potato	cytosol	32.79	62.79
Bra033138.1-P	Field mustard	endoplasmic reticulum, extracellular	61.94	62.7
CDY25290	Canola	endoplasmic reticulum, extracellular	61.94	62.7
KRH77507	Soybean	extracellular	62.35	61.85
VIT_02s0025g04340.t01	Wine grape	endoplasmic reticulum, extracellular, plastid	64.37	60.69
PGSC0003DMT400010887	Potato	cytosol, mitochondrion, nucleus	39.68	57.65
PGSC0003DMT400010891	Potato	cytosol	49.39	56.48
PGSC0003DMT400010888	Potato	extracellular	28.34	49.65
PGSC0003DMT400007866	Potato	endoplasmic reticulum, extracellular	29.15	39.56
PGSC0003DMT400010890	Potato	extracellular	59.51	34.51

Protein Annotations

EntrezGene:102585760	Gene3D:2.60.110.10	MapMan:35.1	InterPro:IPR001938	InterPro:IPR037176	UniProt:M0ZTM9
InterPro:Osmotin/thaumatin-like_sf	PFAM:PF00314	EnsemblPlantsGene:PGSC0003DMG400003042	PGSC:PGSC0003DMG400003042	EnsemblPlants:PGSC0003DMT400007868	PIRSF:PIRSF002703
PRINTS:PR00347	ScanProsite:PS00316	PFscan:PS51367	PANTHER:PTHR31048	PANTHER:PTHR31048:SF47	SMART:SM00205
SUPFAM:SSF49870	SignalP:SignalP-noTM	TMHMM:TMhelix	InterPro:Thaumatin	InterPro:Thaumatin_CS	UniParc:UPI000044F2AF
RefSeq:XP_006358890.1	:	:	:	:	:

Description

Osmotin [Source:PGSC_GENE;Acc:PGSC0003DMG400003042]

Coordinates

chr8:+:54286145..54287111

Molecular Weight (calculated)

26623.4 Da

IEP (calculated)

6.820

GRAVY (calculated)

-0.191

Length

247 amino acids

Sequence
(BLAST)

001: MGYLRSSFVF SLLAFVTFTY AVTIEVRNNC PYIVWAASTP IGGGRRLDRG QTWVIDAPRG TTMARIWGRT GCNFDGAGRG SCMTGDCGGV LQCTGWGKPP
101: NTLAEYALDQ FSNLDFWDIS LVDGFNIPMT FAPTNPSGGK CHAIQCTANI NGECPGQLKV PGGCNNPCTT FGGQQYCCTQ GPCGPTFFSN FFKQRCPDAY
201: SYPQDDPTST FTCPSGSTNY RVVFCPNGVA GPNFPLEMRA STDEVAK

Best Arabidopsis Sequence Match ( AT1G75050.1 )
(BLAST)

001: MANYSSIHIL FLVFITSGIA VSAATVFTLQ NSCPYTVWPG ILSGNDNTLG DGGFPLTPGA SVQLTAPAGW SGRFWARTGC NFDASGHGNC GTGDCGGVLK
101: CNGGGVPPVT LAEFTLVGDG GKDFYDVSLV DGYNVEMGIK PQGGSGDCHY AGCVADVNAV CPNELRLMDP HTGIIAACKS ACAAFNSEEF CCTGAHATPQ
201: TCSPTHYSAM FKSACPGAYS YAYDDATSTF TCTGSNYLIS FCPTRN

Arabidopsis Description

Pathogenesis-related thaumatin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q1PFD2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.