CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g080600.1.1	Tomato	cytosol	21.29	70.67
Solyc08g080610.1.1	Tomato	cytosol	45.78	69.51
Bra033138.1-P	Field mustard	endoplasmic reticulum, extracellular	66.67	68.03
CDY25290	Canola	endoplasmic reticulum, extracellular	66.67	68.03
AT4G11650.1	Thale cress	endoplasmic reticulum, extracellular	66.67	68.03
Solyc08g080620.1.1	Tomato	extracellular	60.24	66.37
PGSC0003DMT400007865	Potato	extracellular	59.84	65.93
KRH59832	Soybean	extracellular	57.83	64.86
Solyc08g080650.1.1	Tomato	extracellular	63.05	63.82
PGSC0003DMT400007870	Potato	extracellular	62.65	63.41
KRH59826	Soybean	extracellular	56.22	62.5
PGSC0003DMT400034395	Potato	extracellular	54.22	62.5
PGSC0003DMT400007868	Potato	extracellular	61.85	62.35
VIT_02s0025g04340.t01	Wine grape	endoplasmic reticulum, extracellular, plastid	65.06	61.83
PGSC0003DMT400007906	Potato	extracellular	61.85	61.6
Solyc08g080640.1.1	Tomato	extracellular	61.04	61.54
Solyc08g080670.1.1	Tomato	extracellular	61.45	61.2
PGSC0003DMT400007869	Potato	cytosol	60.64	61.13
PGSC0003DMT400007905	Potato	extracellular	60.24	60.0
Solyc08g080660.1.1	Tomato	extracellular	60.24	60.0
KRH77506	Soybean	extracellular	51.81	57.85
KRH27960	Soybean	endoplasmic reticulum, extracellular	51.81	57.59
Solyc11g044390.1.1	Tomato	cytosol	16.87	53.85
Solyc11g044400.1.1	Tomato	cytosol	18.07	51.72
Solyc08g080590.2.1	Tomato	nucleus	31.73	50.32
PGSC0003DMT400007866	Potato	endoplasmic reticulum, extracellular	22.09	30.22

Protein Annotations

Gene3D:2.60.110.10	MapMan:35.1	UniProt:A0A0R0LK39	EMBL:ACUP02000674	EnsemblPlantsGene:GLYMA_01G217700	GO:GO:0006950
GO:GO:0008150	GO:GO:0009605	GO:GO:0009607	GO:GO:0009628	GO:GO:0009651	GO:GO:0009817
InterPro:IPR001938	InterPro:IPR037176	EnsemblPlants:KRH77507	ProteinID:KRH77507	ProteinID:KRH77507.1	InterPro:Osmotin/thaumatin-like_sf
PFAM:PF00314	PIRSF:PIRSF002703	PRINTS:PR00347	ScanProsite:PS00316	PFscan:PS51367	PANTHER:PTHR31048
PANTHER:PTHR31048:SF44	SMART:SM00205	SUPFAM:SSF49870	InterPro:Thaumatin	InterPro:Thaumatin_CS	UniParc:UPI0006ED9267

Description

hypothetical protein

Coordinates

chr1:+:54785135..54786700

Molecular Weight (calculated)

27211.8 Da

IEP (calculated)

6.893

GRAVY (calculated)

-0.380

Length

249 amino acids

Sequence
(BLAST)

001: MLFYGDFYVY FRSIPLNIKN TCSHAANFEI VNNCPYTVWA AASPGGGRRL DRGQTWNLWV NPGTAMARIW GRTGCNFDGS GRGRCQTGDC TGGLNCQGWG
101: VPPNTLAEFA LNQFGNQDFY DISLVDGFNI PMDFYPLNGG CHKISCSADI NGQCPGPLRA PGGCNNPCTV FKTNEYCCTN GQGSCGPTNY SRFFKDRCHD
201: SYSYPQDDPT STFTCPAGSN YKVVFCPLGE PHVTLHMPAT TCDKGILNQ

Best Arabidopsis Sequence Match ( AT4G11650.1 )
(BLAST)

001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN

Arabidopsis Description

OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.