Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, extracellular
Predictor Summary:
Predictor Summary:
- plastid 3
- vacuole 3
- endoplasmic reticulum 2
- extracellular 2
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g080600.1.1 | Tomato | cytosol | 20.61 | 72.0 |
| VIT_02s0025g04260.t01 | Wine grape | extracellular | 47.71 | 71.84 |
| VIT_02s0025g04320.t01 | Wine grape | cytosol | 25.57 | 71.28 |
| Solyc08g080610.1.1 | Tomato | cytosol | 44.27 | 70.73 |
| VIT_02s0025g04330.t01 | Wine grape | extracellular | 59.54 | 70.27 |
| VIT_02s0025g04270.t01 | Wine grape | extracellular | 59.92 | 69.78 |
| VIT_02s0025g04230.t01 | Wine grape | extracellular | 59.92 | 69.78 |
| AT4G11650.1 | Thale cress | endoplasmic reticulum, extracellular | 64.89 | 69.67 |
| VIT_02s0025g04250.t01 | Wine grape | extracellular | 59.54 | 69.33 |
| PGSC0003DMT400007865 | Potato | extracellular | 59.54 | 69.03 |
| Bra033138.1-P | Field mustard | endoplasmic reticulum, extracellular | 64.12 | 68.85 |
| CDY25290 | Canola | endoplasmic reticulum, extracellular | 64.12 | 68.85 |
| Solyc08g080620.1.1 | Tomato | extracellular | 58.78 | 68.14 |
| Solyc08g080650.1.1 | Tomato | extracellular | 63.74 | 67.89 |
| VIT_02s0025g04310.t01 | Wine grape | extracellular | 58.02 | 67.56 |
| PGSC0003DMT400007870 | Potato | extracellular | 63.36 | 67.48 |
| Solyc08g080640.1.1 | Tomato | extracellular | 62.98 | 66.8 |
| VIT_02s0025g04300.t01 | Wine grape | extracellular | 56.87 | 66.22 |
| PGSC0003DMT400007905 | Potato | extracellular | 62.98 | 66.0 |
| PGSC0003DMT400034395 | Potato | extracellular | 54.2 | 65.74 |
| PGSC0003DMT400007869 | Potato | cytosol | 61.83 | 65.59 |
| KRH77507 | Soybean | extracellular | 61.83 | 65.06 |
| PGSC0003DMT400007906 | Potato | extracellular | 61.83 | 64.8 |
| Solyc08g080660.1.1 | Tomato | extracellular | 61.83 | 64.8 |
| VIT_02s0025g04290.t01 | Wine grape | extracellular | 55.34 | 64.73 |
| PGSC0003DMT400007868 | Potato | extracellular | 60.69 | 64.37 |
| Solyc08g080670.1.1 | Tomato | extracellular | 61.07 | 64.0 |
| VIT_02s0025g04280.t01 | Wine grape | extracellular | 57.25 | 63.29 |
| Solyc11g044390.1.1 | Tomato | cytosol | 17.56 | 58.97 |
| Solyc11g044400.1.1 | Tomato | cytosol | 18.32 | 55.17 |
| Solyc08g080590.2.1 | Tomato | nucleus | 30.53 | 50.96 |
| PGSC0003DMT400007866 | Potato | endoplasmic reticulum, extracellular | 23.66 | 34.07 |
Protein Annotations
| EntrezGene:100263272 | wikigene:100263272 | Gene3D:2.60.110.10 | MapMan:35.1 | EMBL:AM434172 | ProteinID:CAN71616 |
| ProteinID:CAN71616.1 | ProteinID:CCB58395 | ProteinID:CCB58395.1 | UniProt:F6HUH2 | EMBL:FN596251 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009817 |
| InterPro:IPR001938 | InterPro:IPR037176 | EntrezGene:LOC100263272 | wikigene:LOC100263272 | InterPro:Osmotin/thaumatin-like_sf | PFAM:PF00314 |
| PIRSF:PIRSF002703 | PRINTS:PR00347 | ScanProsite:PS00316 | PFscan:PS51367 | PANTHER:PTHR31048 | PANTHER:PTHR31048:SF36 |
| SMART:SM00205 | SUPFAM:SSF49870 | TIGR:TC65330 | TMHMM:TMhelix | InterPro:Thaumatin | InterPro:Thaumatin_CS |
| UniParc:UPI00021085E1 | ArrayExpress:VIT_02s0025g04340 | EnsemblPlantsGene:VIT_02s0025g04340 | EnsemblPlants:VIT_02s0025g04340.t01 | RefSeq:XP_002282917 | RefSeq:XP_002282917.1 |
| RefSeq:XP_002282917.2 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2:+:3824931..3825899
Molecular Weight (calculated)
28827.0 Da
IEP (calculated)
8.195
GRAVY (calculated)
-0.375
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MRHKPKYTTP DIYTPIVSSK LPSMSDLRIL FIFFLCFISS IHAATFQITN QCSYTVWAAA SPGGGRRLDR GQSWTLNVPA GTKMARIWGR TNCHFDASGR
101: GRCDTGDCGG VLNCQGWGSP PNTLAEYALN QFGNKDFFDI SLVDGFNIPM DFSPTSRGCR GIKCTANING QCPQALKAPG GCNNPCTVFK TPQYCCNNIK
201: CGPTDYSRFF KTRCPDAYSY PQDDPTSTFT CPGGTNYRVV FCPRGSSNNI FPLEMYGSDS EE
101: GRCDTGDCGG VLNCQGWGSP PNTLAEYALN QFGNKDFFDI SLVDGFNIPM DFSPTSRGCR GIKCTANING QCPQALKAPG GCNNPCTVFK TPQYCCNNIK
201: CGPTDYSRFF KTRCPDAYSY PQDDPTSTFT CPGGTNYRVV FCPRGSSNNI FPLEMYGSDS EE
001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
Arabidopsis Description
OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.