Factsheet for PGSC0003DMT400007866

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 7
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g044400.1.1	Tomato	cytosol	15.93	33.33
PGSC0003DMT400007865	Potato	extracellular	39.56	31.86
PGSC0003DMT400034395	Potato	extracellular	37.36	31.48
PGSC0003DMT400007870	Potato	extracellular	42.31	31.3
PGSC0003DMT400007869	Potato	cytosol	42.31	31.17
PGSC0003DMT400007868	Potato	extracellular	39.56	29.15
PGSC0003DMT400010888	Potato	extracellular	20.88	26.95
PGSC0003DMT400007906	Potato	extracellular	35.16	25.6
PGSC0003DMT400010886	Potato	cytosol	31.32	25.11
Bra033138.1-P	Field mustard	endoplasmic reticulum, extracellular	33.52	25.0
CDY25290	Canola	endoplasmic reticulum, extracellular	33.52	25.0
PGSC0003DMT400007905	Potato	extracellular	34.07	24.8
AT4G11650.1	Thale cress	endoplasmic reticulum, extracellular	32.42	24.18
VIT_02s0025g04340.t01	Wine grape	endoplasmic reticulum, extracellular, plastid	34.07	23.66
PGSC0003DMT400010891	Potato	cytosol	26.92	22.69
KRH77507	Soybean	extracellular	30.22	22.09
Solyc11g044390.1.1	Tomato	cytosol	7.69	17.95
PGSC0003DMT400010887	Potato	cytosol, mitochondrion, nucleus	14.29	15.29
PGSC0003DMT400010890	Potato	extracellular	33.52	14.32
PGSC0003DMT400010892	Potato	cytosol	8.24	11.63

Protein Annotations

EnsemblPlants:PGSC0003DMT400007866	EnsemblPlantsGene:PGSC0003DMG400003041	Gene3D:2.60.110.10	InterPro:IPR001938	InterPro:IPR037176	InterPro:Osmotin/thaumatin-like_sf
InterPro:Thaumatin	PANTHER:PTHR31048	PANTHER:PTHR31048:SF47	PFAM:PF00314	PFscan:PS51367	PGSC:PGSC0003DMG400003041
PIRSF:PIRSF002703	PRINTS:PR00347	SignalP:SignalP-noTM	SMART:SM00205	SUPFAM:SSF49870	UniParc:UPI000296A396
UniProt:M0ZTM8	MapMan:35.1	:	:	:	:

Description

Osmotin [Source:PGSC_GENE;Acc:PGSC0003DMG400003041]

Coordinates

chr8:+:54281017..54284908

Molecular Weight (calculated)

20758.8 Da

IEP (calculated)

10.104

GRAVY (calculated)

-0.402

Length

182 amino acids

Sequence
(BLAST)

001: MGYLTSSFIF FFLAFVTYTN AATIEVRNNC PYTVWAALTP IGGGRRLNRG QTWVINAPRG TKMARIWGHT NCNFNGAEYP EDATTLVPRL VDNNIVVPRV
101: HVVLQISQDF SNRGALMRIA THKMILLAHS LAQVIRNPSM RFNLRPDPDS QPKTRHLNWD PDLNPDSRTY RHDPDNQPEI RS

Best Arabidopsis Sequence Match ( AT4G11650.1 )
(BLAST)

001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN

Arabidopsis Description

OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.