Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 6
- vacuole 4
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25290 | Canola | endoplasmic reticulum, extracellular | 88.52 | 88.52 |
| Bra033138.1-P | Field mustard | endoplasmic reticulum, extracellular | 88.52 | 88.52 |
| Solyc08g080600.1.1 | Tomato | cytosol | 23.36 | 76.0 |
| Solyc08g080610.1.1 | Tomato | cytosol | 49.59 | 73.78 |
| PGSC0003DMT400007865 | Potato | extracellular | 63.93 | 69.03 |
| Solyc08g080620.1.1 | Tomato | extracellular | 63.93 | 69.03 |
| KRH77507 | Soybean | extracellular | 68.03 | 66.67 |
| Solyc08g080650.1.1 | Tomato | extracellular | 66.8 | 66.26 |
| PGSC0003DMT400007870 | Potato | extracellular | 66.39 | 65.85 |
| VIT_02s0025g04340.t01 | Wine grape | endoplasmic reticulum, extracellular, plastid | 69.67 | 64.89 |
| PGSC0003DMT400034395 | Potato | extracellular | 56.97 | 64.35 |
| PGSC0003DMT400007869 | Potato | cytosol | 64.34 | 63.56 |
| Solyc08g080640.1.1 | Tomato | extracellular | 63.93 | 63.16 |
| PGSC0003DMT400007868 | Potato | extracellular | 63.93 | 63.16 |
| PGSC0003DMT400007906 | Potato | extracellular | 63.11 | 61.6 |
| Solyc08g080670.1.1 | Tomato | extracellular | 62.7 | 61.2 |
| PGSC0003DMT400007905 | Potato | extracellular | 62.3 | 60.8 |
| Solyc08g080660.1.1 | Tomato | extracellular | 62.3 | 60.8 |
| Solyc11g044390.1.1 | Tomato | cytosol | 18.44 | 57.69 |
| Solyc11g044400.1.1 | Tomato | cytosol | 20.08 | 56.32 |
| Solyc08g080590.2.1 | Tomato | nucleus | 31.15 | 48.41 |
| PGSC0003DMT400007866 | Potato | endoplasmic reticulum, extracellular | 24.18 | 32.42 |
Protein Annotations
| Gene3D:2.60.110.10 | MapMan:35.1 | EntrezGene:826770 | UniProt:A0A178V0T2 | ProteinID:AEE83033.1 | ArrayExpress:AT4G11650 |
| EnsemblPlantsGene:AT4G11650 | RefSeq:AT4G11650 | TAIR:AT4G11650 | RefSeq:AT4G11650-TAIR-G | EnsemblPlants:AT4G11650.1 | TAIR:AT4G11650.1 |
| Symbol:ATOSM34 | Unigene:At.25216 | ProteinID:CAB39936.1 | ProteinID:CAB78208.1 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009816 | GO:GO:0009817 |
| InterPro:IPR001938 | InterPro:IPR037176 | RefSeq:NP_192902.1 | ProteinID:OAO99929.1 | InterPro:Osmotin/thaumatin-like_sf | UniProt:P50700 |
| PFAM:PF00314 | PIRSF:PIRSF002703 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009029 | PO:PO:0009031 |
| PO:PO:0009047 | PO:PO:0020100 | PO:PO:0025281 | PRINTS:PR00347 | ScanProsite:PS00316 | PFscan:PS51367 |
| PANTHER:PTHR31048 | PANTHER:PTHR31048:SF44 | SMART:SM00205 | SUPFAM:SSF49870 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| InterPro:Thaumatin | InterPro:Thaumatin_CS | UniParc:UPI0000052A22 | EMBL:X89008 | SEG:seg | : |
Description
OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
Coordinates
chr4:-:7024852..7026224
Molecular Weight (calculated)
26634.1 Da
IEP (calculated)
6.431
GRAVY (calculated)
-0.295
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.