Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P31470_001 | Banana | endoplasmic reticulum, extracellular | 88.24 | 64.86 |
| VIT_02s0025g04260.t01 | Wine grape | extracellular | 66.18 | 51.72 |
| GSMUA_Achr4P31970_001 | Banana | extracellular | 62.5 | 48.02 |
| GSMUA_Achr7P16510_001 | Banana | endoplasmic reticulum, extracellular | 61.76 | 46.15 |
| GSMUA_Achr9P26190_001 | Banana | extracellular | 66.91 | 44.61 |
| VIT_02s0025g04300.t01 | Wine grape | extracellular | 71.32 | 43.11 |
| VIT_02s0025g04270.t01 | Wine grape | extracellular | 71.32 | 43.11 |
| VIT_02s0025g04250.t01 | Wine grape | extracellular | 71.32 | 43.11 |
| VIT_02s0025g04310.t01 | Wine grape | extracellular | 71.32 | 43.11 |
| VIT_02s0025g04230.t01 | Wine grape | extracellular | 71.32 | 43.11 |
| KRH59832 | Soybean | extracellular | 69.85 | 42.79 |
| PGSC0003DMT400010892 | Potato | cytosol | 38.97 | 41.09 |
| VIT_02s0025g04280.t01 | Wine grape | extracellular | 71.32 | 40.93 |
| KRH59826 | Soybean | extracellular | 66.91 | 40.62 |
| PGSC0003DMT400010886 | Potato | cytosol | 66.18 | 39.65 |
| Solyc12g056390.1.1 | Tomato | extracellular | 65.44 | 39.21 |
| Os03t0663500-00 | Rice | extracellular | 62.5 | 38.81 |
| OQU91235 | Sorghum | extracellular | 65.44 | 38.53 |
| VIT_02s0025g04290.t01 | Wine grape | extracellular | 62.5 | 37.95 |
| Zm00001d021901_P001 | Maize | extracellular | 62.5 | 37.44 |
| Zm00001d033455_P001 | Maize | extracellular | 63.24 | 37.39 |
| EER99598 | Sorghum | endoplasmic reticulum, extracellular | 63.97 | 37.34 |
| TraesCS4D01G015600.1 | Wheat | extracellular | 63.97 | 37.02 |
| TraesCS4B01G017300.1 | Wheat | cytosol, mitochondrion | 47.06 | 36.99 |
| PGSC0003DMT400010887 | Potato | cytosol, mitochondrion, nucleus | 44.85 | 35.88 |
| HORVU4Hr1G002640.1 | Barley | cytosol | 25.74 | 35.71 |
| TraesCS4A01G296400.1 | Wheat | cytosol | 26.47 | 35.64 |
| CDY41250 | Canola | extracellular | 60.29 | 35.5 |
| Bra013674.1-P | Field mustard | extracellular | 60.29 | 35.5 |
| KRH77506 | Soybean | extracellular | 58.09 | 35.43 |
| TraesCS4A01G296300.1 | Wheat | extracellular, unclear | 59.56 | 35.37 |
| KRH27960 | Soybean | endoplasmic reticulum, extracellular | 58.09 | 35.27 |
| TraesCS4D01G015800.1 | Wheat | unclear | 60.29 | 35.19 |
| PGSC0003DMT400010888 | Potato | extracellular | 35.29 | 34.04 |
| CDY53136 | Canola | extracellular | 57.35 | 33.77 |
| PGSC0003DMT400010891 | Potato | cytosol | 52.21 | 32.87 |
| HORVU4Hr1G002650.2 | Barley | extracellular | 61.03 | 32.55 |
| Solyc12g056360.1.1 | Tomato | extracellular | 53.68 | 31.88 |
| Os03t0661600-01 | Rice | extracellular | 63.24 | 30.61 |
| Solyc12g056380.1.1 | Tomato | extracellular | 51.47 | 30.57 |
| Solyc12g056370.1.1 | Tomato | cytosol | 41.18 | 23.93 |
| PGSC0003DMT400010890 | Potato | extracellular | 63.97 | 20.42 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P31500_001 | EnsemblPlants:GSMUA_Achr6T31500_001 | EnsemblPlantsGene:GSMUA_Achr6G31500_001 | Gene3D:2.60.110.10 | InterPro:IPR001938 | InterPro:IPR037176 |
| InterPro:Osmotin/thaumatin-like_sf | InterPro:Thaumatin | PANTHER:PTHR31048 | PANTHER:PTHR31048:SF44 | PFAM:PF00314 | PFscan:PS51367 |
| PIRSF:PIRSF002703 | PRINTS:PR00347 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00205 | SUPFAM:SSF49870 |
| UniParc:UPI0002951401 | UniProt:M0TBU5 | MapMan:35.1 | : | : | : |
Description
Putative Pathogenesis-related protein R major form [Source:GMGC_GENE;Acc:GSMUA_Achr6G31500_001]
Coordinates
chr6:+:31255766..31256805
Molecular Weight (calculated)
14480.0 Da
IEP (calculated)
4.214
GRAVY (calculated)
0.074
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSILSLS FFSLLVTLSH AANFEIVNRC SYTVWAAATG DCGGLLACTA YGSPPNTLAE FALNQYSNQD YVDISLVDGF NVPMDFSPTS GGCRGMRCTA
101: DINKNNCPDA YSYPKDDPTS LVACPGGTNY RVVFCP
101: DINKNNCPDA YSYPKDDPTS LVACPGGTNY RVVFCP
001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
Arabidopsis Description
OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.