Factsheet for Os03t0663500-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 5
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	secretory
YLoc:	extracellular

extracellular: 19038476
extracellular: 19226311
extracellular: 23159799
extracellular: 24083427
extracellular: 26072143

msms PMID: 26072143 doi

B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.

msms PMID: 23159799 doi

SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang

Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

msms PMID: 19226311 doi

WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G002640.1	Barley	cytosol	36.07	80.61
TraesCS4A01G296400.1	Wheat	cytosol	36.99	80.2
Zm00001d033455_P001	Maize	extracellular	83.11	79.13
OQU91235	Sorghum	extracellular	82.65	78.36
TraesCS4D01G015600.1	Wheat	extracellular	81.74	76.17
GSMUA_Achr6P31470_001	Banana	endoplasmic reticulum, extracellular	58.9	69.73
KRH59832	Soybean	extracellular	69.86	68.92
VIT_02s0025g04260.t01	Wine grape	extracellular	53.88	67.82
VIT_02s0025g04270.t01	Wine grape	extracellular	69.41	67.56
KRH59826	Soybean	extracellular	68.95	67.41
VIT_02s0025g04250.t01	Wine grape	extracellular	68.95	67.11
VIT_02s0025g04230.t01	Wine grape	extracellular	68.95	67.11
VIT_02s0025g04310.t01	Wine grape	extracellular	68.04	66.22
PGSC0003DMT400010892	Potato	cytosol	38.81	65.89
VIT_02s0025g04300.t01	Wine grape	extracellular	66.67	64.89
VIT_02s0025g04290.t01	Wine grape	extracellular	65.75	64.29
Os03t0661600-01	Rice	extracellular	82.19	64.06
GSMUA_Achr6P31500_001	Banana	endoplasmic reticulum, extracellular	38.81	62.5
VIT_02s0025g04280.t01	Wine grape	extracellular	64.84	59.92
Solyc12g056390.1.1	Tomato	extracellular	62.1	59.91
PGSC0003DMT400010887	Potato	cytosol, mitochondrion, nucleus	46.12	59.41
PGSC0003DMT400010886	Potato	cytosol	61.19	59.03
Os03t0663400-02	Rice	extracellular	58.45	57.66
KRH77506	Soybean	extracellular	58.45	57.4
Os12t0629600-00	Rice	extracellular	46.12	57.06
Os12t0628600-01	Rice	extracellular	45.66	56.5
PGSC0003DMT400010891	Potato	cytosol	55.71	56.48
Os12t0629700-01	Rice	extracellular	46.12	56.42
KRH27960	Soybean	endoplasmic reticulum, extracellular	57.53	56.25
Os12t0630100-01	Rice	extracellular	46.12	55.49
Solyc12g056360.1.1	Tomato	extracellular	57.99	55.46
Bra013674.1-P	Field mustard	extracellular	55.71	52.81
Os12t0630500-01	Rice	extracellular	61.64	52.33
Os12t0629300-00	Rice	extracellular	41.55	52.3
CDY41250	Canola	extracellular	54.79	51.95
CDY53136	Canola	extracellular	52.97	50.22
Os12t0630200-01	Rice	extracellular	54.34	50.0
Solyc12g056380.1.1	Tomato	extracellular	52.05	49.78
PGSC0003DMT400010888	Potato	extracellular	29.68	46.1
Solyc12g056370.1.1	Tomato	cytosol	38.36	35.9
PGSC0003DMT400010890	Potato	extracellular	64.38	33.1

Protein Annotations

EnsemblPlants:Os03t0663500-00	EnsemblPlantsGene:Os03g0663500	Gene3D:2.60.110.10	InterPro:IPR001938	InterPro:IPR037176	InterPro:Osmotin/thaumatin-like_sf
InterPro:Thaumatin	InterPro:Thaumatin_CS	PANTHER:PTHR31048	PANTHER:PTHR31048:SF47	PFAM:PF00314	PFscan:PS51367
PIRSF:PIRSF002703	PRINTS:PR00347	ProteinID:BAF12747.1	ProteinID:BAS85615.1	ScanProsite:PS00316	SEG:seg
SMART:SM00205	SUPFAM:SSF49870	UniParc:UPI0000E12187	UniProt:Q0DPU1	MapMan:35.1	:

Description

Thaumatin-like proteinSimilar to Osmotin precursor. (Os03t0663500-00)

Coordinates

chr3:-:26034426..26035297

Molecular Weight (calculated)

22720.5 Da

IEP (calculated)

4.222

GRAVY (calculated)

-0.109

Length

219 amino acids

Sequence
(BLAST)

001: PLLLLAAAAN AATFTITNKC QITVWAAAVP SGGGQQLDPG QQWVIDVPAG TTGGRVWART GCSFDGSGNG RCQTGDCGGV LRCAAYGQPP NTLAEFALNQ
101: FSNLDFFDIS LIDGFNVPMD FLPAGDGAGC AKGGPRCEAD VAGQCPSELR APGGCNNACT VFKQDQYCCT GSAANNCGPT NYSQFFKGLC PDAYSYPKDD
201: QTSTFTCPAG TNYQVVFCP

Best Arabidopsis Sequence Match ( AT4G11650.1 )
(BLAST)

001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN

Arabidopsis Description

OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.