Factsheet for Os12t0629300-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 23159799
extracellular: 24083427

msms PMID: 23159799 doi

SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang

Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0628600-01	Rice	extracellular	81.61	80.23
Os12t0629600-00	Rice	extracellular	79.31	77.97
Os12t0630100-01	Rice	extracellular	79.31	75.82
Os12t0629700-01	Rice	extracellular	76.44	74.3
EES17460	Sorghum	endoplasmic reticulum, extracellular	71.26	71.26
OQU79702	Sorghum	endoplasmic reticulum, extracellular	70.69	70.69
Zm00001d031157_P001	Maize	extracellular	70.11	68.93
Zm00001d031155_P001	Maize	extracellular	70.11	68.93
Zm00001d031158_P001	Maize	extracellular	67.82	67.82
EES17459	Sorghum	endoplasmic reticulum, extracellular	66.67	67.05
TraesCS4A01G498000.1	Wheat	extracellular	65.52	64.77
TraesCS6B01G473800.1	Wheat	extracellular	65.52	64.77
TraesCSU01G146600.1	Wheat	extracellular	65.52	64.77
EES17457	Sorghum	endoplasmic reticulum, extracellular	65.52	64.77
TraesCS2A01G110300.1	Wheat	extracellular	64.37	63.64
Os03t0663500-00	Rice	extracellular	52.3	41.55
Os03t0663400-02	Rice	extracellular	46.55	36.49
Os12t0630200-01	Rice	extracellular	48.28	35.29
Os12t0630500-01	Rice	extracellular	51.15	34.5
Os03t0661600-01	Rice	extracellular	52.3	32.38

Protein Annotations

Gene3D:2.60.110.10	MapMan:35.1	EntrezGene:4352853	ProteinID:ABA99521.1	ProteinID:BAF30351.2	ProteinID:BAT18200.1
ProteinID:EAZ21301.1	InterPro:IPR001938	InterPro:IPR037176	EnsemblPlantsGene:Os12g0629300	EnsemblPlants:Os12t0629300-00	InterPro:Osmotin/thaumatin-like_sf
PFAM:PF00314	PIRSF:PIRSF002703	PRINTS:PR00347	ScanProsite:PS00316	PFscan:PS51367	PANTHER:PTHR31048
PANTHER:PTHR31048:SF13	UniProt:Q2QLT3	SMART:SM00205	SUPFAM:SSF49870	SignalP:SignalP-noTM	TMHMM:TMhelix
InterPro:Thaumatin	InterPro:Thaumatin_CS	UniParc:UPI0000680BA3	RefSeq:XP_015618556.1	SEG:seg	:

Description

Similar to Thaumatin-like protein. (Os12t0629300-00)

Coordinates

chr12:-:26922175..26922699

Molecular Weight (calculated)

17608.6 Da

IEP (calculated)

4.342

GRAVY (calculated)

0.221

Length

174 amino acids

Sequence
(BLAST)

001: MASPATSSAV LLVVVLVAAG TANAAIFTIT NQCPYTVWPA ATPVGGGVQL NPGDTWTIDV PAGTSSGRVW GRTGCSFNGA GTGSCATGDC AGALSCTLSG
101: QKPLTLAEFT LAGSAGGSQQ LDFYDVSVID GFNVGMSFSC SSGETLTCRD SCCPDNTKLR HCNANSNYQV LFCP

Best Arabidopsis Sequence Match ( AT4G11650.1 )
(BLAST)

001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN

Arabidopsis Description

OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.