Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d031158_P001 Maize extracellular 87.28 86.78
OQU79702 Sorghum endoplasmic reticulum, extracellular 77.46 77.01
EES17460 Sorghum endoplasmic reticulum, extracellular 74.57 74.14
Os12t0629600-00 Rice extracellular 73.99 72.32
Os12t0628600-01 Rice extracellular 72.83 71.19
Os12t0629700-01 Rice extracellular 72.25 69.83
TraesCSU01G146600.1 Wheat extracellular 69.94 68.75
TraesCS4A01G498000.1 Wheat extracellular 69.94 68.75
EES17457 Sorghum endoplasmic reticulum, extracellular 69.36 68.18
TraesCS6B01G473800.1 Wheat extracellular 69.36 68.18
TraesCS2A01G110300.1 Wheat extracellular 69.36 68.18
Os12t0629300-00 Rice extracellular 67.05 66.67
Os12t0630100-01 Rice extracellular 69.94 66.48
EES16421 Sorghum endoplasmic reticulum, extracellular 65.32 64.2
EES16422 Sorghum extracellular 65.32 64.2
OQU79697 Sorghum extracellular, mitochondrion, plastid 52.6 48.4
OQU79698 Sorghum extracellular, plasma membrane 48.55 43.98
OQU91235 Sorghum extracellular 53.76 40.26
EES01640 Sorghum extracellular 50.29 37.99
EER99598 Sorghum endoplasmic reticulum, extracellular 50.87 37.77
EER93707 Sorghum extracellular 47.98 37.05
Protein Annotations
Gene3D:2.60.110.10MapMan:35.1EntrezGene:8071509UniProt:C5YSK7EnsemblPlants:EES17459ProteinID:EES17459
ProteinID:EES17459.1InterPro:IPR001938InterPro:IPR037176InterPro:Osmotin/thaumatin-like_sfPFAM:PF00314PIRSF:PIRSF002703
PRINTS:PR00347PFscan:PS51367PANTHER:PTHR31048PANTHER:PTHR31048:SF13SMART:SM00205EnsemblPlantsGene:SORBI_3008G182900
SUPFAM:SSF49870unigene:Sbi.11918SignalP:SignalP-noTMTMHMM:TMhelixInterPro:ThaumatinUniParc:UPI0001A88B12
RefSeq:XP_002443621.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr8:-:61635379..61636640
Molecular Weight (calculated)
17567.6 Da
IEP (calculated)
6.702
GRAVY (calculated)
0.095
Length
173 amino acids
Sequence
(BLAST)
001: MAASSSSILL LFLAATLMAS GTHAATFTIK NNCGFTVWPA ATPVGGGTQL NSGGTWTINV PAGTSSGRVW GRTGCSFNGN SGSCQTGDCG GALACTLSGK
101: PPLTLAEFTI GGSQDFYDIS VIDGFNIGMA FSCSTGVGLV CRDSSCPDAY HNPPDRKTHA CGGNSNYQVT FCP
Best Arabidopsis Sequence Match ( AT4G11650.1 )
(BLAST)
001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
Arabidopsis Description
OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.