CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU79697	Sorghum	extracellular, mitochondrion, plastid	53.93	54.79
HORVU3Hr1G056430.1	Barley	endoplasmic reticulum, extracellular	47.12	48.91
EES17459	Sorghum	endoplasmic reticulum, extracellular	43.98	48.55
TraesCS3B01G258200.1	Wheat	endoplasmic reticulum, extracellular	46.6	48.37
TraesCS3A01G226300.1	Wheat	endoplasmic reticulum, extracellular	46.6	48.37
EES17457	Sorghum	endoplasmic reticulum, extracellular	44.5	48.3
EES17460	Sorghum	endoplasmic reticulum, extracellular	43.98	48.28
OQU79702	Sorghum	endoplasmic reticulum, extracellular	43.46	47.7
EES16421	Sorghum	endoplasmic reticulum, extracellular	42.41	46.02
EES16422	Sorghum	extracellular	42.41	46.02
TraesCS3D01G224300.1	Wheat	endoplasmic reticulum, extracellular	43.98	45.65
TraesCS5A01G018500.1	Wheat	extracellular	36.65	38.89
TraesCS5A01G019500.1	Wheat	endoplasmic reticulum, extracellular	35.6	36.96
OQU91235	Sorghum	extracellular	42.93	35.5
EES01640	Sorghum	extracellular	39.79	33.19
EER93707	Sorghum	extracellular	37.17	31.7
EER99598	Sorghum	endoplasmic reticulum, extracellular	38.22	31.33

Protein Annotations

EnsemblPlants:OQU79698	EnsemblPlantsGene:SORBI_3008G181701	Gene3D:2.60.110.10	InterPro:IPR001938	InterPro:IPR037176	InterPro:Osmotin/thaumatin-like_sf
InterPro:Thaumatin	PANTHER:PTHR31048	PANTHER:PTHR31048:SF13	PFAM:PF00314	PFscan:PS51367	PIRSF:PIRSF002703
PRINTS:PR00347	ProteinID:OQU79698	ProteinID:OQU79698.1	SEG:seg	SignalP:SignalP-noTM	SMART:SM00205
SUPFAM:SSF49870	TMHMM:TMhelix	UniParc:UPI000B4264C5	UniProt:A0A1Z5R7F8	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr8:-:61563157..61563732

Molecular Weight (calculated)

19742.6 Da

IEP (calculated)

6.951

GRAVY (calculated)

0.174

Length

191 amino acids

Sequence
(BLAST)

001: MGSLVASGCR PAHFLLLALV ALAAGAGKAS AATFLVLNLC PFPVWPAAVP TGAGTGPLTK LEHAKAWFVR VPSGTGRIWG RTGCDFAGDG EHGGCSTGDC
101: AGALHCQSMG KPPATVAEFT ISDVAGIAND TFGISVADGF NLPLDFACGG GNPRVWKEWV RCREPGCPDA MKVHSCRSEG DYNVVFCPFK D

Best Arabidopsis Sequence Match ( AT4G11650.1 )
(BLAST)

001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN

Arabidopsis Description

OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.