Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G226300.1 | Wheat | endoplasmic reticulum, extracellular | 42.93 | 42.93 |
| TraesCS5A01G018300.1 | Wheat | extracellular | 39.67 | 42.69 |
| TraesCS5A01G018200.1 | Wheat | endoplasmic reticulum, extracellular | 39.13 | 42.11 |
| OQU79697 | Sorghum | extracellular, mitochondrion, plastid | 41.3 | 40.43 |
| TraesCS7A01G558500.1 | Wheat | extracellular | 35.87 | 38.15 |
| TraesCS5A01G018500.1 | Wheat | extracellular | 36.41 | 37.22 |
| TraesCS4A01G498000.1 | Wheat | extracellular | 35.33 | 36.93 |
| TraesCS2A01G110300.1 | Wheat | extracellular | 34.78 | 36.36 |
| OQU79698 | Sorghum | extracellular, plasma membrane | 36.96 | 35.6 |
| TraesCS5A01G018400.1 | Wheat | extracellular | 38.04 | 35.0 |
| TraesCS5A01G018100.1 | Wheat | unclear | 39.13 | 32.0 |
| TraesCS4A01G296300.1 | Wheat | extracellular, unclear | 37.5 | 30.13 |
| TraesCS5A01G017900.1 | Wheat | golgi | 36.41 | 29.78 |
| TraesCS5A01G018000.1 | Wheat | extracellular | 34.78 | 27.23 |
| TraesCS4A01G296400.1 | Wheat | cytosol | 4.89 | 8.91 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G019500.1 | EnsemblPlantsGene:TraesCS5A01G019500 | Gene3D:2.60.110.10 | InterPro:IPR001938 | InterPro:IPR037176 | InterPro:Osmotin/thaumatin-like_sf |
| InterPro:Thaumatin | PANTHER:PTHR31048 | PANTHER:PTHR31048:SF13 | PFAM:PF00314 | PFscan:PS51367 | PIRSF:PIRSF002703 |
| PRINTS:PR00347 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00205 | SUPFAM:SSF49870 | TMHMM:TMhelix |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:15038831..15039385
Molecular Weight (calculated)
19426.3 Da
IEP (calculated)
8.023
GRAVY (calculated)
0.287
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPAAISSA ILLLLFSFSL TAGARGATFT VMNFCPFVVY PAAIPVGWGA EIGTGLGIGQ AWNLAVPAGA SSVRIWARTN CTFDPATGRG SCGTSDCDGA
101: LRCDDYRKPP VTQAEFTLGS SGSAPDSYNY SISLVDGFNV PMGILCPPKY YIHYLLNPQD ILFFVVLYGL RCQGGFSRGG ARSR
101: LRCDDYRKPP VTQAEFTLGS SGSAPDSYNY SISLVDGFNV PMGILCPPKY YIHYLLNPQD ILFFVVLYGL RCQGGFSRGG ARSR
001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
Arabidopsis Description
OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.