Factsheet for TraesCS5A01G018400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G016300.1	Wheat	unclear	92.5	82.59
HORVU5Hr1G005240.1	Barley	plastid	93.0	75.3
TraesCS5A01G018100.1	Wheat	unclear	74.5	66.22
TraesCS5A01G017900.1	Wheat	golgi	62.5	55.56
Zm00001d043121_P001	Maize	extracellular	57.0	51.82
EES01640	Sorghum	extracellular	59.0	51.53
TraesCS5A01G018000.1	Wheat	extracellular	60.5	51.49
TraesCS4A01G296300.1	Wheat	extracellular, unclear	57.5	50.22
TraesCS7A01G558500.1	Wheat	extracellular	42.0	48.55
TraesCS4A01G296400.1	Wheat	cytosol	23.5	46.53
TraesCS4A01G498000.1	Wheat	extracellular	40.5	46.02
TraesCS2A01G110300.1	Wheat	extracellular	40.5	46.02
TraesCS5A01G018200.1	Wheat	endoplasmic reticulum, extracellular	37.5	43.86
TraesCS5A01G018300.1	Wheat	extracellular	37.0	43.27
TraesCS3A01G226300.1	Wheat	endoplasmic reticulum, extracellular	36.0	39.13
TraesCS5A01G018500.1	Wheat	extracellular	34.5	38.33
TraesCS5A01G019500.1	Wheat	endoplasmic reticulum, extracellular	35.0	38.04

Protein Annotations

EnsemblPlants:TraesCS5A01G018400.1	EnsemblPlantsGene:TraesCS5A01G018400	Gene3D:2.60.110.10	InterPro:IPR001938	InterPro:IPR037176	InterPro:Osmotin/thaumatin-like_sf
InterPro:Thaumatin	InterPro:Thaumatin_CS	PANTHER:PTHR31048	PANTHER:PTHR31048:SF42	PFAM:PF00314	PFscan:PS51367
PIRSF:PIRSF002703	PRINTS:PR00347	ScanProsite:PS00316	SEG:seg	SignalP:SignalP-noTM	SMART:SM00205
SUPFAM:SSF49870	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:14416683..14417358

Molecular Weight (calculated)

20580.4 Da

IEP (calculated)

7.402

GRAVY (calculated)

0.101

Length

200 amino acids

Sequence
(BLAST)

001: MASSLFIIAI LLTVAATDAA TITVVNKCSY TVWPAAIPVG GGTKLEPGQM STIHPPAGTN SGRIWARTGC KFDASGKGSC TTGDCGGVLA CRVGVKPPAS
101: LAEYTLGTGS NADFYDISLV DGFNCPSELK VNGGCMSACG KFGTPQYCCP APSTPATCGP TSYSRFFKGL CPDAYSYAYD DKSSTFTCAA GTNYQVTFCP

Best Arabidopsis Sequence Match ( AT1G75030.1 )
(BLAST)

001: MAKISSIHIL FFVFITSGIA DSATVFTLQN SCAYTVWPGT LSGNSITLGD GGFPLTPGAS VQLTAPTGWS GRFWARTGCN FDASGHGTCV TGDCGGVLKC
101: TGGGVPPATL AEFTVGSSNA GMDFYDVSLV DGYNVKMGIK PQGGFGNCKY AGCVSDINEI CPSELRIMDP NSGSVAACKS ACAAFSSPEF CCTGAHATPQ
201: TCSPTYYSSM FKNACPSAYS YAYDDASSTF TCTGSNYLIT FCPTQS

Arabidopsis Description

ATLP-3At1g75030 [Source:UniProtKB/TrEMBL;Acc:Q9C9P9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.