Factsheet for TraesCS5A01G018500.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G018300.1	Wheat	extracellular	41.11	43.27
TraesCS5A01G018200.1	Wheat	endoplasmic reticulum, extracellular	39.44	41.52
OQU79697	Sorghum	extracellular, mitochondrion, plastid	43.33	41.49
TraesCS3A01G226300.1	Wheat	endoplasmic reticulum, extracellular	41.67	40.76
TraesCS2A01G110300.1	Wheat	extracellular	38.33	39.2
TraesCS4A01G498000.1	Wheat	extracellular	38.33	39.2
TraesCS7A01G558500.1	Wheat	extracellular	37.22	38.73
OQU79698	Sorghum	extracellular, plasma membrane	38.89	36.65
TraesCS5A01G019500.1	Wheat	endoplasmic reticulum, extracellular	37.22	36.41
TraesCS5A01G018400.1	Wheat	extracellular	38.33	34.5
TraesCS5A01G018100.1	Wheat	unclear	40.0	32.0
TraesCS4A01G296300.1	Wheat	extracellular, unclear	38.89	30.57
TraesCS5A01G017900.1	Wheat	golgi	37.78	30.22
TraesCS5A01G018000.1	Wheat	extracellular	38.89	29.79
TraesCS4A01G296400.1	Wheat	cytosol	10.56	18.81

Protein Annotations

EnsemblPlants:TraesCS5A01G018500.1	EnsemblPlantsGene:TraesCS5A01G018500	Gene3D:2.60.110.10	InterPro:IPR001938	InterPro:IPR037176	InterPro:Osmotin/thaumatin-like_sf
InterPro:Thaumatin	InterPro:Thaumatin_CS	PANTHER:PTHR31048	PANTHER:PTHR31048:SF13	PFAM:PF00314	PFscan:PS51367
PIRSF:PIRSF002703	PRINTS:PR00347	ScanProsite:PS00316	SignalP:SignalP-noTM	SMART:SM00205	SUPFAM:SSF49870
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:14486728..14487270

Molecular Weight (calculated)

18485.7 Da

IEP (calculated)

4.321

GRAVY (calculated)

0.177

Length

180 amino acids

Sequence
(BLAST)

001: MAAIPFVLVL FVVSYSYTAG AGAAVFTITN WCPDMVYPAS SKDVLGLGFG LPSGDTMHTG ASAGSSGKIW GRTGCTLDAH GNGTCETGDC AGQQVCNVPG
101: KPPATVAEFT LGDTVDYYDL SLADGFNIPI SFGCDDAPGA LVCMDPGCSD AKHRPDDSKV HTCPANSSYH VVFCPAASML

Best Arabidopsis Sequence Match ( AT1G77700.3 )
(BLAST)

001: MQVILSSSLK KPVSLQDQKI TLHLILKYFL VKMPIRFGLS PRILLLFLTI LSGTKWSESA RVFTIINSCD QTIWPAITPG ENFNGGGFEL KPGQSIVFHA
101: PVGWSGRIWG RTGCKFDSTG TGTCETGSCG STLKCSASGK PPASLAEFTL AALDFYDVSL VDGFNLPMSV TPMNGKGNCS VAGCVADLRP HCPQELAVKS
201: NGKVISCRSA CDVFDRDEYC CRGVYGNPVV CQPTYYSKIF KQACPTAYSY AYDDPTSIMT CTASDYVISF CSSRFVLFTF LTTSHDYFNY DSNQVSFILD
301: HDFYIYMIYF IHPLLISYAK VKVIQMQK

Arabidopsis Description

Pathogenesis-related thaumatin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9CA24]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.