Factsheet for TraesCS5A01G018000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G015700.1	Wheat	golgi	96.17	96.17
TraesCS5A01G017900.1	Wheat	golgi	83.83	87.56
TraesCS5B01G016100.1	Wheat	unclear	95.32	87.16
HORVU5Hr1G005180.1	Barley	extracellular	92.77	72.67
Os12t0630200-01	Rice	extracellular	69.79	68.91
Zm00001d043121_P001	Maize	extracellular	60.43	64.55
EES01640	Sorghum	extracellular	60.85	62.45
TraesCS5A01G018400.1	Wheat	extracellular	51.49	60.5
TraesCS5A01G018100.1	Wheat	unclear	56.17	58.67
TraesCS4A01G296400.1	Wheat	cytosol	24.26	56.44
HORVU5Hr1G005510.1	Barley	extracellular, mitochondrion, plastid	17.87	53.16
TraesCS4A01G296300.1	Wheat	extracellular, unclear	51.49	52.84
HORVU5Hr1G051950.1	Barley	extracellular	40.0	50.27
TraesCS5A01G018200.1	Wheat	endoplasmic reticulum, extracellular	35.32	48.54
TraesCS5A01G018300.1	Wheat	extracellular	35.32	48.54
TraesCS7A01G558500.1	Wheat	extracellular	35.32	47.98
TraesCS4A01G498000.1	Wheat	extracellular	34.89	46.59
TraesCS2A01G110300.1	Wheat	extracellular	34.47	46.02
TraesCS3A01G226300.1	Wheat	endoplasmic reticulum, extracellular	32.34	41.3
TraesCS5A01G018500.1	Wheat	extracellular	29.79	38.89
TraesCS5A01G019500.1	Wheat	endoplasmic reticulum, extracellular	27.23	34.78

Protein Annotations

EnsemblPlants:TraesCS5A01G018000.1	EnsemblPlantsGene:TraesCS5A01G018000	Gene3D:2.60.110.10	InterPro:IPR001938	InterPro:IPR037176	InterPro:Osmotin/thaumatin-like_sf
InterPro:Thaumatin	InterPro:Thaumatin_CS	PANTHER:PTHR31048	PANTHER:PTHR31048:SF42	PFAM:PF00314	PFscan:PS51367
PIRSF:PIRSF002703	PRINTS:PR00347	ScanProsite:PS00316	SEG:seg	SignalP:SignalP-noTM	SMART:SM00205
SUPFAM:SSF49870	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5A:-:14227418..14228125

Molecular Weight (calculated)

24672.1 Da

IEP (calculated)

6.456

GRAVY (calculated)

-0.069

Length

235 amino acids

Sequence
(BLAST)

001: MACSRVVHLV ALVLAVVAAA NATTITVVNR CSYTIWPGAL PGGGARLDPG QSWQLNMPAG TAGARVWPRT GCTFDGSGRG HCITGDCAGA LSCRVSGEQP
101: ATLAEYTLGQ GGSQDFFDLS VIDGFNTPMS FQPVGGAPCR AATCAVDITR ECLPELQVPG GCASACGKFG GDTYCCRGQF EHNCPPTNYS RFFKGKCPDA
201: YSYAKDDQTS TFTCPAGTNY QIVLCPARND LHMDQ

Best Arabidopsis Sequence Match ( AT1G75030.1 )
(BLAST)

001: MAKISSIHIL FFVFITSGIA DSATVFTLQN SCAYTVWPGT LSGNSITLGD GGFPLTPGAS VQLTAPTGWS GRFWARTGCN FDASGHGTCV TGDCGGVLKC
101: TGGGVPPATL AEFTVGSSNA GMDFYDVSLV DGYNVKMGIK PQGGFGNCKY AGCVSDINEI CPSELRIMDP NSGSVAACKS ACAAFSSPEF CCTGAHATPQ
201: TCSPTYYSSM FKNACPSAYS YAYDDASSTF TCTGSNYLIT FCPTQS

Arabidopsis Description

ATLP-3At1g75030 [Source:UniProtKB/TrEMBL;Acc:Q9C9P9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.