Factsheet for HORVU5Hr1G005180.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

mitochondrion 2
extracellular 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	extracellular, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	extracellular
TargetP:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G005510.1	Barley	extracellular, mitochondrion, plastid	24.67	93.67
TraesCS5A01G018000.1	Wheat	extracellular	72.67	92.77
TraesCS5B01G015700.1	Wheat	golgi	72.33	92.34
HORVU5Hr1G051960.1	Barley	cytosol	20.67	91.18
TraesCS5B01G016100.1	Wheat	unclear	72.67	84.82
HORVU5Hr1G005310.1	Barley	cytosol	37.33	84.21
HORVU5Hr1G051970.4	Barley	extracellular	66.67	81.63
HORVU5Hr1G051950.1	Barley	extracellular	44.0	70.59
Os12t0630200-01	Rice	extracellular	54.33	68.49
Zm00001d043121_P001	Maize	extracellular	47.67	65.0
EES01640	Sorghum	extracellular	48.0	62.88
HORVU5Hr1G005190.1	Barley	extracellular	45.0	59.73
HORVU4Hr1G002640.1	Barley	cytosol	19.33	59.18
HORVU5Hr1G005240.1	Barley	plastid	47.33	57.49
HORVU4Hr1G002650.2	Barley	extracellular	40.33	47.45
HORVU5Hr1G005300.1	Barley	extracellular	26.67	46.78
HORVU7Hr1G122120.1	Barley	extracellular	26.33	45.66
HORVU3Hr1G056430.1	Barley	endoplasmic reticulum, extracellular	25.33	41.3
HORVU5Hr1G005290.1	Barley	extracellular, plastid	28.33	37.12

Protein Annotations

Gene3D:2.60.110.10	MapMan:35.1	UniProt:A0A287Q7Z4	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
EnsemblPlantsGene:HORVU5Hr1G005180	EnsemblPlants:HORVU5Hr1G005180.1	InterPro:IPR001938	InterPro:IPR037176	InterPro:Osmotin/thaumatin-like_sf	PFAM:PF00314
PIRSF:PIRSF002703	PRINTS:PR00347	ScanProsite:PS00316	PFscan:PS51367	PANTHER:PTHR31048	PANTHER:PTHR31048:SF42
SMART:SM00205	SUPFAM:SSF49870	TMHMM:TMhelix	InterPro:Thaumatin	InterPro:Thaumatin_CS	UniParc:UPI000B47D183
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:8595475..8736940

Molecular Weight (calculated)

32074.1 Da

IEP (calculated)

8.165

GRAVY (calculated)

-0.186

Length

300 amino acids

Sequence
(BLAST)

001: ARQYNGLHCQ STKPPYSQTR TAQAMAFSGV VHLIALVIAA AAAATDATTI TVVNRCSYTI WPGALPGGGA RLDPGQSWQL NMPAGTAGAR VWPRTGCTFD
101: RSGRGRCITG DCAGALVCRV SGEQPATLAE YTLGQGGNRD FFDLSVIDGF NVPMSFQPVG GAPCRAATCA VDITHECLPE LQVPGGCASA CGKFGGDTYC
201: CRGQFEHNCP PTYYSKFFKG KCPDAYSYAK DDQTSTFTCP AGTNYQIVLC PARNDLHMDH YPQQVNMPRS YGAASAAVCS LELPRPVQVR PRVSTRLRLY

Best Arabidopsis Sequence Match ( AT1G75030.1 )
(BLAST)

001: MAKISSIHIL FFVFITSGIA DSATVFTLQN SCAYTVWPGT LSGNSITLGD GGFPLTPGAS VQLTAPTGWS GRFWARTGCN FDASGHGTCV TGDCGGVLKC
101: TGGGVPPATL AEFTVGSSNA GMDFYDVSLV DGYNVKMGIK PQGGFGNCKY AGCVSDINEI CPSELRIMDP NSGSVAACKS ACAAFSSPEF CCTGAHATPQ
201: TCSPTYYSSM FKNACPSAYS YAYDDASSTF TCTGSNYLIT FCPTQS

Arabidopsis Description

ATLP-3At1g75030 [Source:UniProtKB/TrEMBL;Acc:Q9C9P9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.