Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G051960.1 | Barley | cytosol | 30.08 | 58.82 |
| HORVU4Hr1G002640.1 | Barley | cytosol | 33.08 | 44.9 |
| TraesCS5B01G015800.1 | Wheat | mitochondrion | 56.39 | 41.67 |
| HORVU5Hr1G005180.1 | Barley | extracellular | 84.21 | 37.33 |
| HORVU5Hr1G051970.4 | Barley | extracellular | 49.62 | 26.94 |
| Zm00001d043121_P001 | Maize | extracellular | 41.35 | 25.0 |
| EES01640 | Sorghum | extracellular | 42.11 | 24.45 |
| Os12t0630200-01 | Rice | extracellular | 42.11 | 23.53 |
| HORVU5Hr1G005190.1 | Barley | extracellular | 32.33 | 19.03 |
| HORVU5Hr1G005240.1 | Barley | plastid | 34.59 | 18.62 |
| HORVU4Hr1G002650.2 | Barley | extracellular | 31.58 | 16.47 |
| HORVU7Hr1G122120.1 | Barley | extracellular | 10.53 | 8.09 |
| HORVU5Hr1G005300.1 | Barley | extracellular | 9.77 | 7.6 |
| HORVU5Hr1G051950.1 | Barley | extracellular | 10.53 | 7.49 |
| HORVU3Hr1G056430.1 | Barley | endoplasmic reticulum, extracellular | 8.27 | 5.98 |
| HORVU5Hr1G005290.1 | Barley | extracellular, plastid | 9.02 | 5.24 |
| HORVU5Hr1G005510.1 | Barley | extracellular, mitochondrion, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G005310.1 | EnsemblPlantsGene:HORVU5Hr1G005310 | Gene3D:2.60.110.10 | InterPro:IPR001938 | InterPro:IPR037176 | InterPro:Osmotin/thaumatin-like_sf |
| InterPro:Thaumatin | PANTHER:PTHR31048 | PANTHER:PTHR31048:SF42 | PFAM:PF00314 | PFscan:PS51367 | PIRSF:PIRSF002703 |
| SEG:seg | SMART:SM00205 | SUPFAM:SSF49870 | UniParc:UPI000B479F23 | UniProt:A0A287Q8P2 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr5H:+:8830987..8832796
Molecular Weight (calculated)
14828.5 Da
IEP (calculated)
8.629
GRAVY (calculated)
-0.461
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: PGGCASACGK FGGDTYCCRG QFEHNCPPTY YSRFFKGKCP DAYSYAKDDQ TSTFTCPAGT NYQIVLCPAR NDLHMDHYPQ QVNVPRSYGV ASAALCSLEV
101: PRPVQVRPRV STRLRLYWGV SSLASYNLKH HIH
101: PRPVQVRPRV STRLRLYWGV SSLASYNLKH HIH
001: MANISSIHIL FLVFITSGIA VMATDFTLRN NCPTTVWAGT LAGQGPKLGD GGFELTPGAS RQLTAPAGWS GRFWARTGCN FDASGNGRCV TGDCGGLRCN
101: GGGVPPVTLA EFTLVGDGGK DFYDVSLVDG YNVKLGIRPS GGSGDCKYAG CVSDLNAACP DMLKVMDQNN VVACKSACER FNTDQYCCRG ANDKPETCPP
201: TDYSRIFKNA CPDAYSYAYD DETSTFTCTG ANYEITFCP
101: GGGVPPVTLA EFTLVGDGGK DFYDVSLVDG YNVKLGIRPS GGSGDCKYAG CVSDLNAACP DMLKVMDQNN VVACKSACER FNTDQYCCRG ANDKPETCPP
201: TDYSRIFKNA CPDAYSYAYD DETSTFTCTG ANYEITFCP
Arabidopsis Description
PR5Pathogenesis-related protein 5 [Source:UniProtKB/Swiss-Prot;Acc:P28493]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.