Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G002640.1 | Barley | cytosol | 45.59 | 31.63 |
| HORVU5Hr1G005310.1 | Barley | cytosol | 58.82 | 30.08 |
| VIT_02s0025g04320.t01 | Wine grape | cytosol | 41.18 | 29.79 |
| HORVU5Hr1G051970.4 | Barley | extracellular | 80.88 | 22.45 |
| HORVU5Hr1G005180.1 | Barley | extracellular | 91.18 | 20.67 |
| HORVU5Hr1G005190.1 | Barley | extracellular | 51.47 | 15.49 |
| HORVU5Hr1G005240.1 | Barley | plastid | 54.41 | 14.98 |
| Solyc12g056360.1.1 | Tomato | extracellular | 39.71 | 11.79 |
| Solyc12g056380.1.1 | Tomato | extracellular | 38.24 | 11.35 |
| HORVU4Hr1G002650.2 | Barley | extracellular | 41.18 | 10.98 |
| HORVU5Hr1G051950.1 | Barley | extracellular | 16.18 | 5.88 |
| HORVU3Hr1G056430.1 | Barley | endoplasmic reticulum, extracellular | 5.88 | 2.17 |
| PGSC0003DMT400010888 | Potato | extracellular | 4.41 | 2.13 |
| HORVU5Hr1G005300.1 | Barley | extracellular | 4.41 | 1.75 |
| HORVU7Hr1G122120.1 | Barley | extracellular | 4.41 | 1.73 |
| HORVU5Hr1G005290.1 | Barley | extracellular, plastid | 4.41 | 1.31 |
| HORVU5Hr1G005510.1 | Barley | extracellular, mitochondrion, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G051960.1 | EnsemblPlantsGene:HORVU5Hr1G051960 | Gene3D:2.60.110.10 | InterPro:IPR001938 | InterPro:IPR037176 | InterPro:Osmotin/thaumatin-like_sf |
| InterPro:Thaumatin | PANTHER:PTHR31048 | PANTHER:PTHR31048:SF42 | PFAM:PF00314 | PFscan:PS51367 | SUPFAM:SSF49870 |
| UniParc:UPI000B476F25 | UniProt:A0A287R7L1 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:406424994..406425200
Molecular Weight (calculated)
6828.1 Da
IEP (calculated)
7.662
GRAVY (calculated)
-0.231
Length
68 amino acids
Sequence
(BLAST)
(BLAST)
1: VGGAPCRAAP GAVDITHECL PELQVPGGCA SACGKFGGDT YCCRGQFEHN CPPTYYSRFF KGKCPXXX
001: MDRTIEIEFD INGPYDSLIR PNISVASLTS RSENNITFDP KIFSSKDANS FRFVTKDLVT LSHHIIRVWI TIRTPVNYST GTKWSESARV FTIINSCDQT
101: IWPAITPGEN FNGGGFELKP GQSIVFHAPV GWSGRIWGRT GCKFDSTGTG TCETGSCGST LKCSASGKPP ASLAEFTLAA LDFYDVSLVD GFNLPMSVTP
201: MNGKGNCSVA GCVADLRPHC PQELAVKSNG KVISCRSACD VFDRDEYCCR GVYGNPVVCQ PTYYSKIFKQ ACPTAYSYAY DDPTSIMTCT ASDYVISFCS
301: SRFVLFTFLT TSHDYFNYDS NQVSFILDHD FYIYMIYFIH PLLISYAKVK VIQMQK
101: IWPAITPGEN FNGGGFELKP GQSIVFHAPV GWSGRIWGRT GCKFDSTGTG TCETGSCGST LKCSASGKPP ASLAEFTLAA LDFYDVSLVD GFNLPMSVTP
201: MNGKGNCSVA GCVADLRPHC PQELAVKSNG KVISCRSACD VFDRDEYCCR GVYGNPVVCQ PTYYSKIFKQ ACPTAYSYAY DDPTSIMTCT ASDYVISFCS
301: SRFVLFTFLT TSHDYFNYDS NQVSFILDHD FYIYMIYFIH PLLISYAKVK VIQMQK
Arabidopsis Description
Pathogenesis-related thaumatin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9CA24]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.