Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G056430.1 | Barley | endoplasmic reticulum, extracellular | 96.2 | 96.2 |
| TraesCS3B01G258200.1 | Wheat | endoplasmic reticulum, extracellular | 95.65 | 95.65 |
| TraesCS3D01G224300.1 | Wheat | endoplasmic reticulum, extracellular | 88.59 | 88.59 |
| OQU79697 | Sorghum | extracellular, mitochondrion, plastid | 58.7 | 57.45 |
| TraesCS5A01G018300.1 | Wheat | extracellular | 51.09 | 54.97 |
| TraesCS5A01G018200.1 | Wheat | endoplasmic reticulum, extracellular | 50.54 | 54.39 |
| TraesCS4A01G498000.1 | Wheat | extracellular | 48.37 | 50.57 |
| TraesCS2A01G110300.1 | Wheat | extracellular | 47.83 | 50.0 |
| TraesCS7A01G558500.1 | Wheat | extracellular | 46.74 | 49.71 |
| OQU79698 | Sorghum | extracellular, plasma membrane | 48.37 | 46.6 |
| TraesCS5A01G019500.1 | Wheat | endoplasmic reticulum, extracellular | 42.93 | 42.93 |
| TraesCS5A01G018500.1 | Wheat | extracellular | 40.76 | 41.67 |
| TraesCS5A01G018400.1 | Wheat | extracellular | 39.13 | 36.0 |
| TraesCS5A01G018100.1 | Wheat | unclear | 42.39 | 34.67 |
| TraesCS5A01G017900.1 | Wheat | golgi | 41.3 | 33.78 |
| TraesCS4A01G296300.1 | Wheat | extracellular, unclear | 41.3 | 33.19 |
| TraesCS5A01G018000.1 | Wheat | extracellular | 41.3 | 32.34 |
| TraesCS4A01G296400.1 | Wheat | cytosol | 10.33 | 18.81 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G226300.1 | EnsemblPlantsGene:TraesCS3A01G226300 | Gene3D:2.60.110.10 | InterPro:IPR001938 | InterPro:IPR037176 | InterPro:Osmotin/thaumatin-like_sf |
| InterPro:Thaumatin | InterPro:Thaumatin_CS | PANTHER:PTHR31048 | PANTHER:PTHR31048:SF13 | PFAM:PF00314 | PFscan:PS51367 |
| PIRSF:PIRSF002703 | PRINTS:PR00347 | ScanProsite:PS00316 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00205 |
| SUPFAM:SSF49870 | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr3A:-:423688971..423689525
Molecular Weight (calculated)
18442.0 Da
IEP (calculated)
7.815
GRAVY (calculated)
0.161
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPAATSLA LTVVLLLVAF TAGAGAATFS ITNRCPFPVC AAAMPVSGGG GAQLAPGETW TLTFAAGGTG GRIWPRTGCA FDPATGRGGC QTGDCGGALR
101: CVLSGKPPAT LAEFNLANGG APGRYGISVV DRFTLPMDFS CSGAGDGGVI RCRDPGCPDG NHRPGEGKYR ACPAYSDYQV VFCP
101: CVLSGKPPAT LAEFNLANGG APGRYGISVV DRFTLPMDFS CSGAGDGGVI RCRDPGCPDG NHRPGEGKYR ACPAYSDYQV VFCP
001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
Arabidopsis Description
OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.