Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 5
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G056430.1 | Barley | endoplasmic reticulum, extracellular | 96.2 | 96.2 |
| TraesCS3A01G226300.1 | Wheat | endoplasmic reticulum, extracellular | 95.65 | 95.65 |
| TraesCS3D01G224300.1 | Wheat | endoplasmic reticulum, extracellular | 87.5 | 87.5 |
| OQU79697 | Sorghum | extracellular, mitochondrion, plastid | 57.07 | 55.85 |
| TraesCS6B01G473800.1 | Wheat | extracellular | 48.91 | 51.14 |
| TraesCS7B01G483400.1 | Wheat | extracellular | 47.83 | 50.87 |
| OQU79698 | Sorghum | extracellular, plasma membrane | 48.37 | 46.6 |
| TraesCS5B01G016300.1 | Wheat | unclear | 42.93 | 35.27 |
| TraesCS7B01G417700.1 | Wheat | extracellular | 41.85 | 34.22 |
| TraesCS5B01G015900.1 | Wheat | cytosol, extracellular, nucleus | 30.43 | 33.94 |
| TraesCS5B01G016200.1 | Wheat | extracellular | 41.85 | 33.77 |
| TraesCS5B01G015500.1 | Wheat | golgi | 40.76 | 33.33 |
| TraesCS5B01G015600.1 | Wheat | golgi | 40.22 | 33.04 |
| TraesCS5B01G015700.1 | Wheat | golgi | 38.59 | 30.21 |
| TraesCS4B01G017300.1 | Wheat | cytosol, mitochondrion | 27.17 | 28.9 |
| TraesCS5B01G016100.1 | Wheat | unclear | 39.13 | 28.02 |
| TraesCS5B01G016000.1 | Wheat | extracellular, unclear | 40.22 | 23.87 |
| TraesCS5B01G015800.1 | Wheat | mitochondrion | 19.02 | 19.44 |
Protein Annotations
| Gene3D:2.60.110.10 | MapMan:35.1 | InterPro:IPR001938 | InterPro:IPR037176 | InterPro:Osmotin/thaumatin-like_sf | PFAM:PF00314 |
| PIRSF:PIRSF002703 | PRINTS:PR00347 | ScanProsite:PS00316 | PFscan:PS51367 | PANTHER:PTHR31048 | PANTHER:PTHR31048:SF13 |
| SMART:SM00205 | SUPFAM:SSF49870 | SignalP:SignalP-noTM | TMHMM:TMhelix | InterPro:Thaumatin | InterPro:Thaumatin_CS |
| EnsemblPlantsGene:TraesCS3B01G258200 | EnsemblPlants:TraesCS3B01G258200.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3B:+:416098303..416098857
Molecular Weight (calculated)
18395.1 Da
IEP (calculated)
8.034
GRAVY (calculated)
0.210
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPAATSLA LAVILLLVAF TAGAGAATFS ITNRCPFPVC AAAMPVSGGG GAQLAPGETW TLTFAAGGTS GRIWPRMGCA FHPATGRGGC QTGDCGGALR
101: CVLSGKPPAT LAEFNLANGG APGRYGISVV DGFTLPMDFS CSGAGDGGVI RCRDPGCPDG NHRPGDGKYR ACPAYSDYKV VFCP
101: CVLSGKPPAT LAEFNLANGG APGRYGISVV DGFTLPMDFS CSGAGDGGVI RCRDPGCPDG NHRPGDGKYR ACPAYSDYKV VFCP
001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
Arabidopsis Description
OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [extracellular,endoplasmic reticulum]
SUBAcon: [extracellular,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.