Factsheet for TraesCS6B01G473800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G146600.1	Wheat	extracellular	98.86	98.86
TraesCS4A01G498000.1	Wheat	extracellular	98.86	98.86
TraesCS2A01G110300.1	Wheat	extracellular	98.3	98.3
OQU79702	Sorghum	endoplasmic reticulum, extracellular	69.32	70.11
Zm00001d031157_P001	Maize	extracellular	70.45	70.06
Zm00001d031155_P001	Maize	extracellular	70.45	70.06
EES17459	Sorghum	endoplasmic reticulum, extracellular	68.18	69.36
Zm00001d031158_P001	Maize	extracellular	68.18	68.97
Os12t0629600-00	Rice	extracellular	67.61	67.23
EES17457	Sorghum	endoplasmic reticulum, extracellular	67.05	67.05
EES17460	Sorghum	endoplasmic reticulum, extracellular	65.91	66.67
Os12t0628600-01	Rice	extracellular	66.48	66.1
Os12t0629300-00	Rice	extracellular	64.77	65.52
Os12t0629700-01	Rice	extracellular	65.91	64.8
Os12t0630100-01	Rice	extracellular	65.34	63.19
TraesCS7B01G483400.1	Wheat	extracellular	61.36	62.43
TraesCS3B01G258200.1	Wheat	endoplasmic reticulum, extracellular	51.14	48.91
TraesCS5B01G016300.1	Wheat	unclear	50.57	39.73
TraesCS7B01G417700.1	Wheat	extracellular	48.3	37.78
TraesCS5B01G016200.1	Wheat	extracellular	48.3	37.28
TraesCS5B01G015500.1	Wheat	golgi	47.16	36.89
TraesCS5B01G015600.1	Wheat	golgi	46.02	36.16
TraesCS4B01G017300.1	Wheat	cytosol, mitochondrion	35.23	35.84
TraesCS5B01G015700.1	Wheat	golgi	46.02	34.47
TraesCS5B01G015900.1	Wheat	cytosol, extracellular, nucleus	31.25	33.33
TraesCS5B01G016100.1	Wheat	unclear	46.59	31.91
TraesCS5B01G016000.1	Wheat	extracellular, unclear	47.16	26.77
TraesCS5B01G015800.1	Wheat	mitochondrion	23.3	22.78

Protein Annotations

EnsemblPlants:TraesCS6B01G473800.1	EnsemblPlantsGene:TraesCS6B01G473800	Gene3D:2.60.110.10	InterPro:IPR001938	InterPro:IPR037176	InterPro:Osmotin/thaumatin-like_sf
InterPro:Thaumatin	PANTHER:PTHR31048	PANTHER:PTHR31048:SF13	PFAM:PF00314	PFscan:PS51367	PIRSF:PIRSF002703
PRINTS:PR00347	SEG:seg	SignalP:SignalP-noTM	SMART:SM00205	SUPFAM:SSF49870	TIGR:cd09217
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:720805007..720805537

Molecular Weight (calculated)

18364.3 Da

IEP (calculated)

4.390

GRAVY (calculated)

-0.078

Length

176 amino acids

Sequence
(BLAST)

001: MASSHLAAAA SMVLFLAVFA ASTNAATFNI KNNCPYTVWP AATPIGGGRQ LNTGETWTLD VPANTPSGRV WGRTGCNFNG NSGSCQTADC GGALSCTLSG
101: QPPLTLAEFT VGNGQDFYDI SVIDGFNVPL SFSCSNGPNL VCQADKCPDA YLFPTDDTKN HACNGNNNSY QVTFCP

Best Arabidopsis Sequence Match ( AT4G11650.1 )
(BLAST)

001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN

Arabidopsis Description

OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.