CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU79702	Sorghum	endoplasmic reticulum, extracellular	78.41	79.31
EES17460	Sorghum	endoplasmic reticulum, extracellular	71.02	71.84
Os12t0629600-00	Rice	extracellular	72.16	71.75
Os12t0628600-01	Rice	extracellular	71.59	71.19
Os12t0629700-01	Rice	extracellular	71.59	70.39
Os12t0630100-01	Rice	extracellular	72.16	69.78
EES17459	Sorghum	endoplasmic reticulum, extracellular	68.18	69.36
EES16422	Sorghum	extracellular	69.32	69.32
EES16421	Sorghum	endoplasmic reticulum, extracellular	68.75	68.75
TraesCSU01G146600.1	Wheat	extracellular	67.61	67.61
TraesCS4A01G498000.1	Wheat	extracellular	67.61	67.61
TraesCS6B01G473800.1	Wheat	extracellular	67.05	67.05
TraesCS2A01G110300.1	Wheat	extracellular	66.48	66.48
Os12t0629300-00	Rice	extracellular	64.77	65.52
OQU79697	Sorghum	extracellular, mitochondrion, plastid	57.95	54.26
OQU79698	Sorghum	extracellular, plasma membrane	48.3	44.5
OQU91235	Sorghum	extracellular	54.55	41.56
EER99598	Sorghum	endoplasmic reticulum, extracellular	50.57	38.2
EES01640	Sorghum	extracellular	48.86	37.55
EER93707	Sorghum	extracellular	47.73	37.5

Protein Annotations

Gene3D:2.60.110.10	MapMan:35.1	EntrezGene:8081618	UniProt:C5YSK3	EnsemblPlants:EES17457	ProteinID:EES17457
ProteinID:EES17457.1	InterPro:IPR001938	InterPro:IPR037176	InterPro:Osmotin/thaumatin-like_sf	PFAM:PF00314	PIRSF:PIRSF002703
PRINTS:PR00347	ScanProsite:PS00316	PFscan:PS51367	PANTHER:PTHR31048	PANTHER:PTHR31048:SF13	SMART:SM00205
EnsemblPlantsGene:SORBI_3008G182500	SUPFAM:SSF49870	unigene:Sbi.12231	SignalP:SignalP-noTM	TMHMM:TMhelix	InterPro:Thaumatin
InterPro:Thaumatin_CS	UniParc:UPI0001A88B10	RefSeq:XP_002443619.1	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:61606430..61607273

Molecular Weight (calculated)

18475.7 Da

IEP (calculated)

7.560

GRAVY (calculated)

-0.149

Length

176 amino acids

Sequence
(BLAST)

001: MASPAASWVL FLLAAMTGCA SAATFTIKNN CPYTVWPAAT PVGGGTQLNP GQTWTINVPA GTKSGRVWGR TGCSFNSGGR GHCATGDCGG ALSCTLSGQP
101: PLTLAEFTIG YTNGPNDYYD ISVIDGYNLA MDFSCSTGMN LHCSRPRCPD AYLYPTDDTK THGCRGNSNY KVTFCP

Best Arabidopsis Sequence Match ( AT4G11650.1 )
(BLAST)

001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN

Arabidopsis Description

OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.