CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16422	Sorghum	extracellular	98.86	98.86
EES17457	Sorghum	endoplasmic reticulum, extracellular	68.75	68.75
OQU79702	Sorghum	endoplasmic reticulum, extracellular	67.61	68.39
TraesCS7D01G551400.1	Wheat	extracellular	66.48	67.63
HORVU7Hr1G122120.1	Barley	extracellular	65.91	67.05
TraesCS7B01G483400.1	Wheat	extracellular	65.91	67.05
TraesCS7A01G558500.1	Wheat	extracellular	65.34	66.47
EES17459	Sorghum	endoplasmic reticulum, extracellular	64.2	65.32
EES17460	Sorghum	endoplasmic reticulum, extracellular	63.64	64.37
OQU79697	Sorghum	extracellular, mitochondrion, plastid	51.14	47.87
OQU79698	Sorghum	extracellular, plasma membrane	46.02	42.41
EES01640	Sorghum	extracellular	52.84	40.61
OQU91235	Sorghum	extracellular	51.7	39.39
EER93707	Sorghum	extracellular	49.43	38.84
EER99598	Sorghum	endoplasmic reticulum, extracellular	47.16	35.62

Protein Annotations

Gene3D:2.60.110.10	MapMan:35.1	EntrezGene:8081620	UniProt:C5YSK5	EnsemblPlants:EES16421	ProteinID:EES16421
ProteinID:EES16421.1	InterPro:IPR001938	InterPro:IPR037176	InterPro:Osmotin/thaumatin-like_sf	PFAM:PF00314	PIRSF:PIRSF002703
PRINTS:PR00347	PFscan:PS51367	PANTHER:PTHR31048	PANTHER:PTHR31048:SF13	SMART:SM00205	EnsemblPlantsGene:SORBI_3008G182700
SUPFAM:SSF49870	unigene:Sbi.20311	SignalP:SignalP-noTM	TMHMM:TMhelix	InterPro:Thaumatin	UniParc:UPI0001A88207
RefSeq:XP_002442583.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:61621296..61622128

Molecular Weight (calculated)

18172.0 Da

IEP (calculated)

5.556

GRAVY (calculated)

-0.085

Length

176 amino acids

Sequence
(BLAST)

001: MASTTSMPSI LFLLLAAFAA SASAATFTIK NNCGYTVWPA GIPVGGGTQL NSGQTWTVNV PAGTSGRFWG RTGCSFSGGS GHCDSGDCAG KLSCTVSGQT
101: PATLAEYTIG GTGNPQDYYD ISCVDGYNQP MSFSCSTGVA LSCTYAKCPD AYQYSTDDKK THACSANSNY QITFCP

Best Arabidopsis Sequence Match ( AT4G11650.1 )
(BLAST)

001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN

Arabidopsis Description

OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.