CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031157_P001	Maize	extracellular	91.95	90.4
Zm00001d031155_P001	Maize	extracellular	91.95	90.4
EES17460	Sorghum	endoplasmic reticulum, extracellular	78.74	78.74
EES17457	Sorghum	endoplasmic reticulum, extracellular	79.31	78.41
EES17459	Sorghum	endoplasmic reticulum, extracellular	77.01	77.46
Os12t0629600-00	Rice	extracellular	78.74	77.4
Os12t0628600-01	Rice	extracellular	78.16	76.84
Os12t0629700-01	Rice	extracellular	77.59	75.42
Os12t0630100-01	Rice	extracellular	75.29	71.98
Os12t0629300-00	Rice	extracellular	70.69	70.69
TraesCS4A01G498000.1	Wheat	extracellular	70.69	69.89
TraesCSU01G146600.1	Wheat	extracellular	70.69	69.89
TraesCS6B01G473800.1	Wheat	extracellular	70.11	69.32
TraesCS2A01G110300.1	Wheat	extracellular	69.54	68.75
EES16422	Sorghum	extracellular	68.97	68.18
EES16421	Sorghum	endoplasmic reticulum, extracellular	68.39	67.61
OQU79697	Sorghum	extracellular, mitochondrion, plastid	57.47	53.19
OQU79698	Sorghum	extracellular, plasma membrane	47.7	43.46
OQU91235	Sorghum	extracellular	56.9	42.86
EES01640	Sorghum	extracellular	50.57	38.43
EER93707	Sorghum	extracellular	48.28	37.5
EER99598	Sorghum	endoplasmic reticulum, extracellular	48.85	36.48

Protein Annotations

Gene3D:2.60.110.10	MapMan:35.1	EntrezGene:8081619	UniProt:C5YSK4	ProteinID:EES17458.1	InterPro:IPR001938
InterPro:IPR037176	EnsemblPlants:OQU79702	ProteinID:OQU79702	ProteinID:OQU79702.1	InterPro:Osmotin/thaumatin-like_sf	PFAM:PF00314
PIRSF:PIRSF002703	PRINTS:PR00347	ScanProsite:PS00316	PFscan:PS51367	PANTHER:PTHR31048	PANTHER:PTHR31048:SF13
SMART:SM00205	EnsemblPlantsGene:SORBI_3008G182600	SUPFAM:SSF49870	unigene:Sbi.9411	SignalP:SignalP-noTM	TMHMM:TMhelix
InterPro:Thaumatin	InterPro:Thaumatin_CS	UniParc:UPI0001A88B11	RefSeq:XP_002443620.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:-:61611073..61613121

Molecular Weight (calculated)

17624.5 Da

IEP (calculated)

4.439

GRAVY (calculated)

0.087

Length

174 amino acids

Sequence
(BLAST)

001: MASPAASSVL SLLLLAAFVG TARAATFTIT NNCGSTVWPA ATPVGGGTQL DPGQTWTINV PAGTSSGRVW GRTGCSFNGG SGSCQTGDCG GALSCTLSGQ
101: PPMTLAEFTI GGSQDFYDIS VIDGYNLAMR FSCSTGVTLN CGGSSCPDAY LFPSDNTKTH ACNGNSNYQV TFCP

Best Arabidopsis Sequence Match ( AT4G11650.1 )
(BLAST)

001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN

Arabidopsis Description

OSM34OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.