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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • nucleus 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, extracellular, nucleus
Any Predictor:cytosol, extracellular, nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G015600.1 Wheat golgi 87.88 64.73
TraesCS5B01G016200.1 Wheat extracellular 84.24 60.96
HORVU5Hr1G005190.1 Barley extracellular 79.39 57.96
TraesCS5B01G016300.1 Wheat unclear 76.97 56.7
TraesCS4B01G017300.1 Wheat cytosol, mitochondrion 50.3 47.98
TraesCS5B01G015800.1 Wheat mitochondrion 50.91 46.67
Zm00001d043121_P001 Maize extracellular 56.97 42.73
TraesCS7B01G417700.1 Wheat extracellular 56.36 41.33
TraesCS5B01G015500.1 Wheat golgi 55.76 40.89
EES01640 Sorghum extracellular 56.36 40.61
TraesCS5B01G015700.1 Wheat golgi 56.36 39.57
TraesCS5B01G016100.1 Wheat unclear 56.36 36.19
TraesCS7B01G483400.1 Wheat extracellular 34.55 32.95
TraesCS6B01G473800.1 Wheat extracellular 33.33 31.25
TraesCS3B01G258200.1 Wheat endoplasmic reticulum, extracellular 33.94 30.43
TraesCS5B01G016000.1 Wheat extracellular, unclear 56.97 30.32
Protein Annotations
EnsemblPlants:TraesCS5B01G015900.1EnsemblPlantsGene:TraesCS5B01G015900Gene3D:2.60.110.10InterPro:IPR001938InterPro:IPR037176InterPro:Osmotin/thaumatin-like_sf
InterPro:ThaumatinPANTHER:PTHR31048PANTHER:PTHR31048:SF42PFAM:PF00314PFscan:PS51367PIRSF:PIRSF002703
PRINTS:PR00347SMART:SM00205SUPFAM:SSF49870MapMan:35.1::
Description
No Description!
Coordinates
chr5B:+:15094157..15094654
Molecular Weight (calculated)
17394.7 Da
IEP (calculated)
7.099
GRAVY (calculated)
0.021
Length
165 amino acids
Sequence
(BLAST)
001: MVSGWIWGRI GCKFDASGRG PCITGNCGGV LSCAAGGKPP ATLAEYTLGK GGSPDFYDIP LVDGFNVPMS FGPIGSSCHA IICTADINAK CPSELKVDGG
101: CVSACIKFGT TQYCCMPPLT PSTCGPTDYS RFFKGHCPDA YSYAYEKSST FTCHVRSDYQ VTFCP
Best Arabidopsis Sequence Match ( AT1G19320.1 )
(BLAST)
001: MAIFSTSHLL FISFIIATCT ISVSGTTFTL TNHCGSTIWP GILTANGAQL GDGGFALASG SSVTFTVSPG WSGRFWARTY CNFDASGSGK CGTGDCGSKL
101: KCAGAGGAPP ATLAEFTIGS SGKKNAVQDF YDVSLVDGYN VQMKITPQGG SGDCKTAGCV SDVNAICPKE LQVTGPSGVA ACKSACEAFN KPEYCCTGAY
201: STPATCPPTN YSKIFKQACP SAYSYAYDDA SSTFTCTNAN YEISFCS
Arabidopsis Description
At1g19320 [Source:UniProtKB/TrEMBL;Acc:Q9LN66]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.