Factsheet for TraesCS5B01G015600.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G015900.1	Wheat	cytosol, extracellular, nucleus	64.73	87.88
TraesCS5B01G016200.1	Wheat	extracellular	85.71	84.21
HORVU5Hr1G005190.1	Barley	extracellular	81.25	80.53
TraesCS5B01G016300.1	Wheat	unclear	73.21	73.21
TraesCS7B01G417700.1	Wheat	extracellular	54.91	54.67
Zm00001d043121_P001	Maize	extracellular	52.23	53.18
TraesCS5B01G015500.1	Wheat	golgi	53.12	52.89
EES01640	Sorghum	extracellular	54.02	52.84
TraesCS5B01G015700.1	Wheat	golgi	54.46	51.91
TraesCS4B01G017300.1	Wheat	cytosol, mitochondrion	38.84	50.29
TraesCS5B01G015800.1	Wheat	mitochondrion	39.29	48.89
TraesCS5B01G016100.1	Wheat	unclear	54.46	47.47
TraesCS7B01G483400.1	Wheat	extracellular	36.61	47.4
TraesCS6B01G473800.1	Wheat	extracellular	36.16	46.02
TraesCS3B01G258200.1	Wheat	endoplasmic reticulum, extracellular	33.04	40.22
TraesCS5B01G016000.1	Wheat	extracellular, unclear	54.46	39.35

Protein Annotations

EnsemblPlants:TraesCS5B01G015600.1	EnsemblPlantsGene:TraesCS5B01G015600	Gene3D:2.60.110.10	InterPro:IPR001938	InterPro:IPR037176	InterPro:Osmotin/thaumatin-like_sf
InterPro:Thaumatin	InterPro:Thaumatin_CS	PANTHER:PTHR31048	PANTHER:PTHR31048:SF42	PFAM:PF00314	PFscan:PS51367
PIRSF:PIRSF002703	PRINTS:PR00347	ScanProsite:PS00316	SEG:seg	SignalP:SignalP-noTM	SMART:SM00205
SUPFAM:SSF49870	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:15050618..15051292

Molecular Weight (calculated)

23547.0 Da

IEP (calculated)

6.204

GRAVY (calculated)

0.119

Length

224 amino acids

Sequence
(BLAST)

001: MASSLSFILA LLLAIAATDA FTVHLLNKCP YTVWPGTYPV RSGSRLDPGQ LAAIEVSPGM VSGWIWGRTG CNFDASGRGS CTTGDCGGML SCAAGFKPPA
101: TLAEYTLGKG GSPDFYDISI ADGFNVPMSF GPVGSSCHVV SCAADINAKC PSELKVDGGC VSACIKFGTP QYCCTPPLMP STCGPTDYSR FFKGHCPDAY
201: SYAYEKNSTF TCTVRSDYQV TFCP

Best Arabidopsis Sequence Match ( AT1G19320.1 )
(BLAST)

001: MAIFSTSHLL FISFIIATCT ISVSGTTFTL TNHCGSTIWP GILTANGAQL GDGGFALASG SSVTFTVSPG WSGRFWARTY CNFDASGSGK CGTGDCGSKL
101: KCAGAGGAPP ATLAEFTIGS SGKKNAVQDF YDVSLVDGYN VQMKITPQGG SGDCKTAGCV SDVNAICPKE LQVTGPSGVA ACKSACEAFN KPEYCCTGAY
201: STPATCPPTN YSKIFKQACP SAYSYAYDDA SSTFTCTNAN YEISFCS

Arabidopsis Description

At1g19320 [Source:UniProtKB/TrEMBL;Acc:Q9LN66]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.