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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY22653 Canola cytosol 96.41 69.91
Bra031652.1-P Field mustard cytosol 92.16 66.98
CDY06342 Canola cytosol 92.16 66.82
AT1G08980.1 Thale cress cytosol 82.35 59.29
VIT_14s0128g00320.t01 Wine grape cytosol 62.09 43.88
PGSC0003DMT400093880 Potato cytosol 60.46 42.82
KRH33958 Soybean cytosol 60.46 42.73
KRG92836 Soybean cytosol 59.8 42.26
Solyc10g086170.1.1 Tomato cytosol 58.5 42.02
GSMUA_Achr3P09030_001 Banana cytosol, plasma membrane 51.96 38.04
TraesCS2D01G573300.1 Wheat cytosol 52.94 36.08
EER97555 Sorghum cytosol 50.98 35.7
TraesCS2A01G562400.1 Wheat cytosol 52.94 35.53
Os04t0118100-01 Rice cytosol 50.33 35.4
TraesCS2B01G624200.1 Wheat cytosol 50.98 34.67
Zm00001d006886_P002 Maize cytosol 50.0 34.46
Os04t0117900-01 Rice plasma membrane, plastid 47.39 33.41
TraesCS2B01G603900.1 Wheat cytosol 47.06 32.58
TraesCS2D01G573400.3 Wheat cytosol, endoplasmic reticulum, peroxisome 42.81 30.25
TraesCS5D01G083700.1 Wheat cytosol 28.1 28.57
HORVU6Hr1G060680.1 Barley cytosol 13.73 26.42
CDY51926 Canola endoplasmic reticulum 41.5 21.49
CDX75952 Canola endoplasmic reticulum 41.18 21.36
CDX93679 Canola mitochondrion 40.52 20.63
CDY40591 Canola endoplasmic reticulum, golgi 40.2 20.5
CDX69906 Canola cytosol, plastid 39.22 19.9
CDY21581 Canola cytosol 39.22 19.9
CDX95800 Canola endoplasmic reticulum 40.85 16.34
CDX92180 Canola endoplasmic reticulum 42.16 16.17
CDY04173 Canola plastid 18.95 10.78
CDY59872 Canola plastid 18.95 10.78
CDY46805 Canola cytosol 19.93 9.98
CDY58262 Canola cytosol 19.93 9.9
CDY31318 Canola cytosol 19.61 9.79
CDX84527 Canola cytosol 19.28 9.58
CDY46509 Canola cytosol 5.56 9.39
CDX98979 Canola plastid 14.71 6.93
CDX70030 Canola plastid 14.38 6.8
CDX69905 Canola mitochondrion 0.0 0.0
Protein Annotations
EnsemblPlants:CDY03602EnsemblPlantsGene:GSBRNA2T00116351001Gene3D:3.90.1300.10GO:A0A078ERD7GO:GO:0003674GO:GO:0003824
GO:GO:0004040GO:GO:0016787InterPro:AS_sfInterPro:AmidaseInterPro:Amidase_domInterPro:IPR036928
KEGG:00970+6.3.5.7MetaCyc:PWY-5921PANTHER:PTHR11895PANTHER:PTHR11895:SF111PFAM:PF01425ProteinID:CDY03602
ProteinID:CDY03602.1SEG:segSUPFAM:SSF75304UniParc:UPI0004EEDD64MapMan:35.1:
Description
BnaC03g68610D
Coordinates
chrLK031944:+:797040..799178
Molecular Weight (calculated)
33204.3 Da
IEP (calculated)
5.327
GRAVY (calculated)
0.252
Length
306 amino acids
Sequence
(BLAST)
001: MSDRIISVLY QTYTGTDTGG SVRVPASYCG IFGLRPSHGV VSTVGVTPMA QSFDTVGWFA RDTATLKRVG CVLLQQPHLD ATEPSQLIIA DDCFKLCSVP
101: RELLVLPLVQ SVDKSFGGNT VINKVDLGAY IEEHVPSLKH FMTSETQREF CIPSLMALSS SMRMLQRFEF KMNHGEWVSL VKPEFGPGIS ERIEEAIRVS
201: DEKIDLCRLV KTELLTALST LLGDNGVLVI PTVPGPPPHL QADVVALESF RSRAFSLLSI AGVSGLCQVS IPLGLHENLP ISVSLVATHG SDGFLLSLVD
301: SLSEFM
Best Arabidopsis Sequence Match ( AT1G08980.1 )
(BLAST)
001: MATNNDFGAF IEKVTISPTS TSSSPPSLQG LTFAIKDIFD VEGRVTGFGN PDWLRTHSAA TSTAPVVSSL LEAGATALGI TIMDEMAYSI NGENAHYGTP
101: RNPIAFDRVP GGSSSGSAVA VAARLVDFSI GTDTGGSVRV PASYCGIFGF RPSHGAVSTV GLTPMAQSFD TVGWFARDTA TLKRVGCVLL QQHHLNPIEP
201: SQLIIADDCF KLCSVPHDLL VQPLVGSVEK SFGGNTVVKK VNLGEYIGQN VPSLKHFMTS DDVTTQQEFC IPSLMALSSS MRLLQRHEFK INHGAWISSV
301: KPEFGPGISE RIEEAIRTSD EKIDHCRSVK SELITALSTL LGEKGVLVIP TVPGPPPHLQ ANVAALESFR SRAFSLLSIA GVSGFCQVSI PLGLHENLPV
401: SVSLVAKYGS DGFLLSLVDS LAAFI
Arabidopsis Description
AMI1Amidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FR37]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.