Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031652.1-P | Field mustard | cytosol | 86.12 | 86.94 |
| CDY06342 | Canola | cytosol | 86.12 | 86.73 |
| CDY22653 | Canola | cytosol | 85.18 | 85.78 |
| CDY03602 | Canola | cytosol, plastid | 59.29 | 82.35 |
| KRH33958 | Soybean | cytosol | 66.82 | 65.59 |
| KRG92836 | Soybean | cytosol | 66.35 | 65.13 |
| VIT_14s0128g00320.t01 | Wine grape | cytosol | 66.12 | 64.9 |
| PGSC0003DMT400093880 | Potato | cytosol | 61.41 | 60.42 |
| Solyc10g086170.1.1 | Tomato | cytosol | 60.0 | 59.86 |
| GSMUA_Achr3P09030_001 | Banana | cytosol, plasma membrane | 56.24 | 57.18 |
| Os04t0118100-01 | Rice | cytosol | 56.94 | 55.63 |
| EER97555 | Sorghum | cytosol | 56.47 | 54.92 |
| TraesCS2D01G573300.1 | Wheat | cytosol | 57.41 | 54.34 |
| Zm00001d006886_P002 | Maize | cytosol | 56.24 | 53.83 |
| TraesCS2A01G562400.1 | Wheat | cytosol | 57.65 | 53.73 |
| TraesCS2B01G624200.1 | Wheat | cytosol | 56.71 | 53.56 |
| Os04t0117900-01 | Rice | plasma membrane, plastid | 54.59 | 53.46 |
| HORVU6Hr1G060680.1 | Barley | cytosol | 19.76 | 52.83 |
| TraesCS2B01G603900.1 | Wheat | cytosol | 54.35 | 52.26 |
| TraesCS5D01G083700.1 | Wheat | cytosol | 36.71 | 51.83 |
| TraesCS2D01G573400.3 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 49.41 | 48.5 |
| AT3G17970.1 | Thale cress | endoplasmic reticulum | 48.24 | 34.8 |
| AT5G09420.1 | Thale cress | cytosol | 47.76 | 33.66 |
| AT3G25660.1 | Thale cress | plastid | 21.88 | 17.32 |
| AT5G64440.1 | Thale cress | cytosol, nucleus, peroxisome | 24.0 | 16.8 |
| AT5G07360.1 | Thale cress | plastid | 16.94 | 10.93 |
Protein Annotations
| KEGG:00970+6.3.5.7 | MapMan:11.2.1.2.1 | Gene3D:3.90.1300.10 | EntrezGene:837418 | UniProt:A0A178WIS5 | ProteinID:AAB70409.1 |
| ProteinID:AEE28378.1 | EMBL:AF202077 | InterPro:AS_sf | ArrayExpress:AT1G08980 | EnsemblPlantsGene:AT1G08980 | RefSeq:AT1G08980 |
| TAIR:AT1G08980 | RefSeq:AT1G08980-TAIR-G | EnsemblPlants:AT1G08980.1 | TAIR:AT1G08980.1 | Symbol:ATAMI1 | EMBL:AY037198 |
| InterPro:Amidase | InterPro:Amidase_CS | InterPro:Amidase_dom | Unigene:At.21299 | EMBL:BT004554 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004040 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005654 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009684 | GO:GO:0009851 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016810 | GO:GO:0043864 |
| InterPro:IPR036928 | RefSeq:NP_563831.1 | ProteinID:OAP18278.1 | PFAM:PF01425 | PO:PO:0000013 | PO:PO:0000014 |
| PO:PO:0000037 | PO:PO:0000056 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| ScanProsite:PS00571 | PANTHER:PTHR11895 | PANTHER:PTHR11895:SF111 | UniProt:Q9FR37 | SUPFAM:SSF75304 | UniParc:UPI000000C3A9 |
| SEG:seg | : | : | : | : | : |
Description
AMI1Amidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FR37]
Coordinates
chr1:+:2884351..2886621
Molecular Weight (calculated)
45058.9 Da
IEP (calculated)
6.229
GRAVY (calculated)
0.162
Length
425 amino acids
Sequence
(BLAST)
(BLAST)
001: MATNNDFGAF IEKVTISPTS TSSSPPSLQG LTFAIKDIFD VEGRVTGFGN PDWLRTHSAA TSTAPVVSSL LEAGATALGI TIMDEMAYSI NGENAHYGTP
101: RNPIAFDRVP GGSSSGSAVA VAARLVDFSI GTDTGGSVRV PASYCGIFGF RPSHGAVSTV GLTPMAQSFD TVGWFARDTA TLKRVGCVLL QQHHLNPIEP
201: SQLIIADDCF KLCSVPHDLL VQPLVGSVEK SFGGNTVVKK VNLGEYIGQN VPSLKHFMTS DDVTTQQEFC IPSLMALSSS MRLLQRHEFK INHGAWISSV
301: KPEFGPGISE RIEEAIRTSD EKIDHCRSVK SELITALSTL LGEKGVLVIP TVPGPPPHLQ ANVAALESFR SRAFSLLSIA GVSGFCQVSI PLGLHENLPV
401: SVSLVAKYGS DGFLLSLVDS LAAFI
101: RNPIAFDRVP GGSSSGSAVA VAARLVDFSI GTDTGGSVRV PASYCGIFGF RPSHGAVSTV GLTPMAQSFD TVGWFARDTA TLKRVGCVLL QQHHLNPIEP
201: SQLIIADDCF KLCSVPHDLL VQPLVGSVEK SFGGNTVVKK VNLGEYIGQN VPSLKHFMTS DDVTTQQEFC IPSLMALSSS MRLLQRHEFK INHGAWISSV
301: KPEFGPGISE RIEEAIRTSD EKIDHCRSVK SELITALSTL LGEKGVLVIP TVPGPPPHLQ ANVAALESFR SRAFSLLSIA GVSGFCQVSI PLGLHENLPV
401: SVSLVAKYGS DGFLLSLVDS LAAFI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.