Factsheet for Zm00001d006886_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97555	Sorghum	cytosol	92.34	93.82
Os04t0118100-01	Rice	cytosol	76.8	78.39
TraesCS2D01G573300.1	Wheat	cytosol	75.23	74.39
TraesCS2B01G624200.1	Wheat	cytosol	75.23	74.22
Os04t0117900-01	Rice	plasma membrane, plastid	72.3	73.96
TraesCS2A01G562400.1	Wheat	cytosol	73.42	71.49
TraesCS2B01G603900.1	Wheat	cytosol	68.47	68.78
TraesCS5D01G083700.1	Wheat	cytosol	45.72	67.44
TraesCS2D01G573400.3	Wheat	cytosol, endoplasmic reticulum, peroxisome	64.86	66.51
GSMUA_Achr3P09030_001	Banana	cytosol, plasma membrane	56.53	60.05
VIT_14s0128g00320.t01	Wine grape	cytosol	58.33	59.82
KRG92836	Soybean	cytosol	56.31	57.74
Bra031652.1-P	Field mustard	cytosol	54.73	57.72
CDY06342	Canola	cytosol	54.73	57.58
KRH33958	Soybean	cytosol	55.86	57.27
HORVU2Hr1G126540.1	Barley	cytosol	43.69	57.06
CDY22653	Canola	cytosol	54.05	56.87
AT1G08980.1	Thale cress	cytosol	53.83	56.24
Solyc10g086170.1.1	Tomato	cytosol	53.15	55.4
CDY03602	Canola	cytosol, plastid	34.46	50.0
Zm00001d013463_P001	Maize	golgi, plasma membrane, vacuole	32.21	32.35
Zm00001d033682_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	43.69	32.23
Zm00001d018098_P005	Maize	plasma membrane	40.32	29.15
Zm00001d002104_P001	Maize	mitochondrion, plastid	20.72	16.85
Zm00001d023543_P003	Maize	cytosol, endoplasmic reticulum, peroxisome	21.17	14.92
Zm00001d004817_P002	Maize	cytosol, golgi, peroxisome	20.95	14.9
Zm00001d024936_P002	Maize	mitochondrion	19.82	12.72
Zm00001d052660_P002	Maize	mitochondrion	17.79	12.02
PGSC0003DMT400031298	Potato	cytosol	0.68	1.88

Protein Annotations

KEGG:00970+6.3.5.7	EntrezGene:100384731	MapMan:11.2.1.2.1	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase
InterPro:Amidase_CS	InterPro:Amidase_dom	EMBL:BT084073	UniProt:C4IZS6	GO:GO:0003674	GO:GO:0003824
GO:GO:0004040	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654
GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009684
GO:GO:0009851	GO:GO:0009987	GO:GO:0016787	GO:GO:0016810	GO:GO:0043864	InterPro:IPR036928
ProteinID:ONM25409.1	PFAM:PF01425	ScanProsite:PS00571	PANTHER:PTHR11895	PANTHER:PTHR11895:SF111	SUPFAM:SSF75304
UniParc:UPI0001A4C46D	EnsemblPlantsGene:Zm00001d006886	EnsemblPlants:Zm00001d006886_P002	EnsemblPlants:Zm00001d006886_T002	SEG:seg	:

Description

Amidase 1

Coordinates

chr2:+:218575862..218578925

Molecular Weight (calculated)

47270.6 Da

IEP (calculated)

6.582

GRAVY (calculated)

0.050

Length

444 amino acids

Sequence
(BLAST)

001: MAMGLEDGEY GAFMEKFKML PSQSQHQQQL PLHGLTFAIK DIFDIGGRVT GFGNPDWART HAPAGATSPV VLAALAAGAI SIGKTVMDEM AYSINGENAH
101: YGTPTNPCAP DRVPGGSSSG SAVAVAAKLV DFALGTDTGG SVRVPAAYCG IFGLRPSHGL VSTENVIPMS QMFDTVGWFA RDLSMLSCVS NVLLPLAADN
201: TIKQPTHVTI PKDCFEILGS LSDQTYQILN ASVAKRFGND AVDNRNLGEF VSANVPTVGK FISDFSRSEA PSVPALSVIS YVMRCLQRSE FKANHGEWVK
301: TVKPNLGPGI RERVHEAIAS EDGPMEDFHV LKTEFKSALS ALIKDDGILA IPTVPGSPPK LRMEAVALEN FRARAFSLLS IAGLSGFCQL SIPLGVRHGV
401: PVSVSLVACH GADRFLLSVA QELYGTLKQE TKKAWSWSSS DSSL

Best Arabidopsis Sequence Match ( AT1G08980.1 )
(BLAST)

001: MATNNDFGAF IEKVTISPTS TSSSPPSLQG LTFAIKDIFD VEGRVTGFGN PDWLRTHSAA TSTAPVVSSL LEAGATALGI TIMDEMAYSI NGENAHYGTP
101: RNPIAFDRVP GGSSSGSAVA VAARLVDFSI GTDTGGSVRV PASYCGIFGF RPSHGAVSTV GLTPMAQSFD TVGWFARDTA TLKRVGCVLL QQHHLNPIEP
201: SQLIIADDCF KLCSVPHDLL VQPLVGSVEK SFGGNTVVKK VNLGEYIGQN VPSLKHFMTS DDVTTQQEFC IPSLMALSSS MRLLQRHEFK INHGAWISSV
301: KPEFGPGISE RIEEAIRTSD EKIDHCRSVK SELITALSTL LGEKGVLVIP TVPGPPPHLQ ANVAALESFR SRAFSLLSIA GVSGFCQVSI PLGLHENLPV
401: SVSLVAKYGS DGFLLSLVDS LAAFI

Arabidopsis Description

AMI1Amidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FR37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.