Factsheet for TraesCS5D01G083700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G573300.1	Wheat	cytosol	79.73	53.45
EER97555	Sorghum	cytosol	67.44	46.45
Zm00001d006886_P002	Maize	cytosol	67.44	45.72
Os04t0118100-01	Rice	cytosol	65.45	45.29
TraesCS2D01G573400.3	Wheat	cytosol, endoplasmic reticulum, peroxisome	65.12	45.27
Os04t0117900-01	Rice	plasma membrane, plastid	64.78	44.93
Bra031652.1-P	Field mustard	cytosol	52.82	37.77
CDY06342	Canola	cytosol	52.82	37.68
CDY22653	Canola	cytosol	52.82	37.68
VIT_14s0128g00320.t01	Wine grape	cytosol	53.16	36.95
AT1G08980.1	Thale cress	cytosol	51.83	36.71
KRG92836	Soybean	cytosol	52.16	36.26
GSMUA_Achr3P09030_001	Banana	cytosol, plasma membrane	49.83	35.89
KRH33958	Soybean	cytosol	51.49	35.8
HORVU2Hr1G126540.1	Barley	cytosol	40.2	35.59
Solyc10g086170.1.1	Tomato	cytosol	46.84	33.1
CDY03602	Canola	cytosol, plastid	28.57	28.1
TraesCS6D01G298000.1	Wheat	plastid	38.54	19.05
TraesCS4D01G040700.1	Wheat	endoplasmic reticulum	36.21	18.54
TraesCS2D01G521500.1	Wheat	plastid	23.59	13.12
TraesCS4D01G108100.1	Wheat	cytosol	23.59	11.74
TraesCS1D01G421100.1	Wheat	golgi	23.26	11.48
TraesCS2D01G040000.1	Wheat	cytosol	21.26	10.74
TraesCS2D01G039700.2	Wheat	cytoskeleton, cytosol, peroxisome	21.93	10.71
TraesCS2D01G039600.2	Wheat	mitochondrion, nucleus, peroxisome	21.59	10.37
TraesCS2D01G039900.1	Wheat	mitochondrion	20.6	10.21
TraesCS3D01G341200.1	Wheat	mitochondrion, vacuole	19.93	9.36
PGSC0003DMT400031298	Potato	cytosol	1.0	1.88

Protein Annotations

EnsemblPlants:TraesCS5D01G083700.1	EnsemblPlantsGene:TraesCS5D01G083700	Gene3D:3.90.1300.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040
GO:GO:0016787	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_dom	InterPro:IPR036928	KEGG:00970+6.3.5.7
PANTHER:PTHR11895	PANTHER:PTHR11895:SF111	PFAM:PF01425	SEG:seg	SUPFAM:SSF75304	MapMan:35.1

Description

No Description!

Coordinates

chr5D:-:87427744..87429800

Molecular Weight (calculated)

32324.9 Da

IEP (calculated)

8.487

GRAVY (calculated)

0.093

Length

301 amino acids

Sequence
(BLAST)

001: MVRSWLPPPS SDHQQQLPLH TLTFAIKEIF DVVIRVTGFG TPDWARTHAP GAAMTPAVLA ALAAGAGVGK TMMDEMAYSI NGENAHYGTP SNPCAPRIPS
101: GSSSGSAAAV AASLTDFAGT DSCGSVRVPA AYCGIFGLYP SHGLVSTQMF KTRLMVFFLT RWFARDLATL SCVTDVLMPP LRRPHLRRPS HVIIPADYLK
201: ILGSMEDRTY EILNASAAKV FGNDTVVNNG NIGDFVSSNV PSIGKFMTDL SAVEASSSCV PSLSAISRVM RVLQWSEFKT NHAEWVNIVK PNLGPGIRER
301: V

Best Arabidopsis Sequence Match ( AT1G08980.1 )
(BLAST)

001: MATNNDFGAF IEKVTISPTS TSSSPPSLQG LTFAIKDIFD VEGRVTGFGN PDWLRTHSAA TSTAPVVSSL LEAGATALGI TIMDEMAYSI NGENAHYGTP
101: RNPIAFDRVP GGSSSGSAVA VAARLVDFSI GTDTGGSVRV PASYCGIFGF RPSHGAVSTV GLTPMAQSFD TVGWFARDTA TLKRVGCVLL QQHHLNPIEP
201: SQLIIADDCF KLCSVPHDLL VQPLVGSVEK SFGGNTVVKK VNLGEYIGQN VPSLKHFMTS DDVTTQQEFC IPSLMALSSS MRLLQRHEFK INHGAWISSV
301: KPEFGPGISE RIEEAIRTSD EKIDHCRSVK SELITALSTL LGEKGVLVIP TVPGPPPHLQ ANVAALESFR SRAFSLLSIA GVSGFCQVSI PLGLHENLPV
401: SVSLVAKYGS DGFLLSLVDS LAAFI

Arabidopsis Description

AMI1Amidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FR37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.