Factsheet for HORVU2Hr1G126540.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G624200.1	Wheat	cytosol	75.88	57.33
TraesCS2D01G573300.1	Wheat	cytosol	75.0	56.79
TraesCS2A01G562400.1	Wheat	cytosol	74.12	55.26
TraesCS2B01G603900.1	Wheat	cytosol	63.53	48.87
TraesCS2D01G573400.3	Wheat	cytosol, endoplasmic reticulum, peroxisome	61.47	48.27
EER97555	Sorghum	cytosol	57.35	44.62
Zm00001d006886_P002	Maize	cytosol	57.06	43.69
Os04t0118100-01	Rice	cytosol	54.41	42.53
Os04t0117900-01	Rice	plasma membrane, plastid	52.06	40.78
TraesCS5D01G083700.1	Wheat	cytosol	35.59	40.2
HORVU6Hr1G078210.1	Barley	mitochondrion	28.24	17.2
HORVU4Hr1G006870.1	Barley	plastid	28.24	14.72
HORVU6Hr1G060680.1	Barley	cytosol	4.71	10.06
HORVU2Hr1G115000.1	Barley	cytosol, plastid	14.12	8.62
HORVU1Hr1G090770.2	Barley	endoplasmic reticulum, golgi, plasma membrane	11.76	6.57
HORVU4Hr1G019600.11	Barley	cytosol	11.18	6.28
HORVU3Hr1G088210.5	Barley	endoplasmic reticulum, golgi	11.18	5.71
HORVU5Hr1G093800.2	Barley	mitochondrion, plastid	5.59	5.16
PGSC0003DMT400031298	Potato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU2Hr1G126540.1	EnsemblPlantsGene:HORVU2Hr1G126540	Gene3D:3.90.1300.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040
GO:GO:0016787	InterPro:AS_sf	InterPro:Amidase	InterPro:IPR036928	KEGG:00970+6.3.5.7	PANTHER:PTHR11895
PANTHER:PTHR11895:SF111	SEG:seg	SUPFAM:SSF75304	UniParc:UPI000B464402	UniProt:A0A287JU08	MapMan:35.1

Description

No Description!

Coordinates

chrchr2H:-:763693944..763695606

Molecular Weight (calculated)

32761.2 Da

IEP (calculated)

6.305

GRAVY (calculated)

0.126

Length

340 amino acids

Sequence
(BLAST)

001: DLFTSSWRYX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXSAHNIIH LLKLKCLFSS MKPCHCVSAY TGWFARDVAT LSRVSDVLLP PVSTDAELPR
101: PSRVIIPADC FKILGSSDDD HTYEILNACA AKVFGSDAVV DNGDLGDFVS SNVPRIGKFM TDLSAIEASS SCVPSLSAIS RVMRVLQRSE FKANHAEWVN
201: TVKPNLGPGI RERVQEAIAS EDRSAMDDLH AVRTEFKSAL AALLKDDGIL AIPTVPGAPP KLRMDAALLE DFRARAFSLL SIAGLSGFCQ VSIPLGTRHG
301: VPVSVSLLAG HGGDRFLVAV AQELQEALQA EAAAAWGSSA

Best Arabidopsis Sequence Match ( AT1G08980.1 )
(BLAST)

001: MATNNDFGAF IEKVTISPTS TSSSPPSLQG LTFAIKDIFD VEGRVTGFGN PDWLRTHSAA TSTAPVVSSL LEAGATALGI TIMDEMAYSI NGENAHYGTP
101: RNPIAFDRVP GGSSSGSAVA VAARLVDFSI GTDTGGSVRV PASYCGIFGF RPSHGAVSTV GLTPMAQSFD TVGWFARDTA TLKRVGCVLL QQHHLNPIEP
201: SQLIIADDCF KLCSVPHDLL VQPLVGSVEK SFGGNTVVKK VNLGEYIGQN VPSLKHFMTS DDVTTQQEFC IPSLMALSSS MRLLQRHEFK INHGAWISSV
301: KPEFGPGISE RIEEAIRTSD EKIDHCRSVK SELITALSTL LGEKGVLVIP TVPGPPPHLQ ANVAALESFR SRAFSLLSIA GVSGFCQVSI PLGLHENLPV
401: SVSLVAKYGS DGFLLSLVDS LAAFI

Arabidopsis Description

AMI1Amidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FR37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.