Factsheet for TraesCS2B01G624200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G562400.1	Wheat	cytosol	94.44	93.2
TraesCS2B01G603900.1	Wheat	cytosol	86.0	87.56
TraesCS2D01G573400.3	Wheat	cytosol, endoplasmic reticulum, peroxisome	78.67	81.76
EER97555	Sorghum	cytosol	74.22	76.43
HORVU2Hr1G126540.1	Barley	cytosol	57.33	75.88
Zm00001d006886_P002	Maize	cytosol	74.22	75.23
Os04t0118100-01	Rice	cytosol	72.44	74.94
Os04t0117900-01	Rice	plasma membrane, plastid	69.78	72.35
VIT_14s0128g00320.t01	Wine grape	cytosol	57.11	59.35
GSMUA_Achr3P09030_001	Banana	cytosol, plasma membrane	54.67	58.85
KRG92836	Soybean	cytosol	55.56	57.74
Bra031652.1-P	Field mustard	cytosol	54.0	57.72
CDY22653	Canola	cytosol	54.0	57.58
CDY06342	Canola	cytosol	54.0	57.58
AT1G08980.1	Thale cress	cytosol	53.56	56.71
KRH33958	Soybean	cytosol	54.44	56.58
Solyc10g086170.1.1	Tomato	cytosol	52.22	55.16
CDY03602	Canola	cytosol, plastid	34.67	50.98
TraesCS6B01G349000.1	Wheat	plastid	40.89	30.21
TraesCS4B01G043200.1	Wheat	endoplasmic reticulum	37.11	28.5
TraesCS2B01G549500.1	Wheat	mitochondrion, plastid	22.67	18.85
TraesCS1B01G443700.1	Wheat	golgi	21.11	15.57
TraesCS2B01G053700.1	Wheat	mitochondrion, nucleus, peroxisome	20.67	15.1
TraesCS2B01G053800.1	Wheat	cytosol	19.78	14.61
TraesCS3B01G379500.5	Wheat	golgi, vacuole	17.78	12.56
PGSC0003DMT400031298	Potato	cytosol	0.89	2.5

Protein Annotations

EnsemblPlants:TraesCS2B01G624200.1	EnsemblPlantsGene:TraesCS2B01G624200	Gene3D:3.90.1300.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040
GO:GO:0016787	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_CS	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR11895	PANTHER:PTHR11895:SF111	PFAM:PF01425	ScanProsite:PS00571	SEG:seg
SUPFAM:SSF75304	MapMan:11.2.1.2.1	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:797464238..797466192

Molecular Weight (calculated)

46789.5 Da

IEP (calculated)

4.768

GRAVY (calculated)

0.123

Length

450 amino acids

Sequence
(BLAST)

001: MEGSGDDHGA FIEKFILPPP NSSDQQQQQL PLHGLTFAIK DIFDVAGRVT GFGTPDWART HAPAAATAPA VLAALAAGAT GVGKTVMDEM AYSINGENAH
101: YGTPANPCAP GRVPGGSSSG SAVAVAASLA DFALGTDTGG SVRVPAAYCG IFGLRPSHGL VSTENVVPMA QMFDTVGWFA RDLPTLSRVT DVMLPPVAAA
201: TDVDAEIRRR PSRVIIPADC FKILGSSDDD HTYEILNACA AKVFGCDAVV DNGNLGDFVS SNVPSIGKFM TDLSAVEASS SCVPALSAIS RVMRVLQRSE
301: FKANHAEWVN TVKPNLGPGI RERVQEAIAS EDESAMEDLH AVRTEFKSAL AALLKDDGIL AIPTVPGAPP KLRMDAALLE DFRARAFSLL SIAGLSGFCQ
401: ISIPLGTRDG VPVSVSLLAG HGGDRFVVAV AQELHEALQA EAAATWGSSA

Best Arabidopsis Sequence Match ( AT1G08980.1 )
(BLAST)

001: MATNNDFGAF IEKVTISPTS TSSSPPSLQG LTFAIKDIFD VEGRVTGFGN PDWLRTHSAA TSTAPVVSSL LEAGATALGI TIMDEMAYSI NGENAHYGTP
101: RNPIAFDRVP GGSSSGSAVA VAARLVDFSI GTDTGGSVRV PASYCGIFGF RPSHGAVSTV GLTPMAQSFD TVGWFARDTA TLKRVGCVLL QQHHLNPIEP
201: SQLIIADDCF KLCSVPHDLL VQPLVGSVEK SFGGNTVVKK VNLGEYIGQN VPSLKHFMTS DDVTTQQEFC IPSLMALSSS MRLLQRHEFK INHGAWISSV
301: KPEFGPGISE RIEEAIRTSD EKIDHCRSVK SELITALSTL LGEKGVLVIP TVPGPPPHLQ ANVAALESFR SRAFSLLSIA GVSGFCQVSI PLGLHENLPV
401: SVSLVAKYGS DGFLLSLVDS LAAFI

Arabidopsis Description

AMI1Amidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FR37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.