CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 1
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33958	Soybean	cytosol	95.38	95.38
VIT_14s0128g00320.t01	Wine grape	cytosol	72.06	72.06
AT1G08980.1	Thale cress	cytosol	65.13	66.35
Bra031652.1-P	Field mustard	cytosol	63.28	65.08
CDY06342	Canola	cytosol	63.28	64.93
CDY22653	Canola	cytosol	62.59	64.22
PGSC0003DMT400093880	Potato	cytosol	62.36	62.5
Solyc10g086170.1.1	Tomato	cytosol	60.97	61.97
GSMUA_Achr3P09030_001	Banana	cytosol, plasma membrane	59.12	61.24
CDY03602	Canola	cytosol, plastid	42.26	59.8
Os04t0118100-01	Rice	cytosol	59.35	59.08
EER97555	Sorghum	cytosol	58.66	58.12
TraesCS2D01G573300.1	Wheat	cytosol	59.12	57.02
Zm00001d006886_P002	Maize	cytosol	57.74	56.31
Os04t0117900-01	Rice	plasma membrane, plastid	56.35	56.22
TraesCS2B01G624200.1	Wheat	cytosol	57.74	55.56
TraesCS2A01G562400.1	Wheat	cytosol	57.74	54.82
TraesCS2B01G603900.1	Wheat	cytosol	54.5	53.39
HORVU6Hr1G060680.1	Barley	cytosol	19.17	52.2
TraesCS5D01G083700.1	Wheat	cytosol	36.26	52.16
TraesCS2D01G573400.3	Wheat	cytosol, endoplasmic reticulum, peroxisome	51.96	51.96
KRH58264	Soybean	golgi, plasma membrane	33.49	44.75
KRH43896	Soybean	cytosol, endoplasmic reticulum	51.27	37.12
KRH41841	Soybean	endoplasmic reticulum	50.58	37.06
KRH60539	Soybean	extracellular	50.12	36.97
KRH10544	Soybean	golgi	50.81	36.79
KRH58262	Soybean	cytosol	14.78	23.02
KRG98874	Soybean	mitochondrion	19.4	17.68
KRH59629	Soybean	golgi	24.25	17.27
KRH10653	Soybean	cytosol	24.02	17.13
KRH40976	Soybean	golgi	24.02	17.08
KRH21697	Soybean	cytosol	23.79	16.97
KRH46093	Soybean	mitochondrion	20.32	16.21
KRH63971	Soybean	cytosol, golgi, peroxisome	22.86	15.97
KRH53966	Soybean	cytosol, golgi, peroxisome	22.63	15.78
KRH41039	Soybean	mitochondrion	15.47	13.73
KRH59711	Soybean	plasma membrane	18.48	12.92

Protein Annotations

KEGG:00970+6.3.5.7	EntrezGene:100780821	MapMan:11.2.1.2.1	Gene3D:3.90.1300.10	EMBL:ACUP02012768	InterPro:AS_sf
InterPro:Amidase	InterPro:Amidase_CS	InterPro:Amidase_dom	EnsemblPlantsGene:GLYMA_20G232900	GO:GO:0003674	GO:GO:0003824
GO:GO:0004040	GO:GO:0016787	UniProt:I1NIY1	InterPro:IPR036928	EnsemblPlants:KRG92836	ProteinID:KRG92836
ProteinID:KRG92836.1	PFAM:PF01425	ScanProsite:PS00571	PANTHER:PTHR11895	PANTHER:PTHR11895:SF111	MetaCyc:PWY-5921
SUPFAM:SSF75304	UniParc:UPI000233DD77	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:46605392..46609655

Molecular Weight (calculated)

46538.8 Da

IEP (calculated)

5.771

GRAVY (calculated)

0.055

Length

433 amino acids

Sequence
(BLAST)

001: METASDYGAF MEKFTLPPNS APSLPLNSLT FAVKEIFDVE GYVTGFGNPD WARTHTVATS TAPTVLALLR AGATCVGKTV MDEMAYSING ENIHYGTPRN
101: PCAPDRVPGG SSSGSAVAVG AELVDFSLGT DTGGSVRVPA SYCGIFGFRP SHGAISESGV IPMSQSFDTV GWFARDPMIL SRVGGVILQL PDVAPPIRPT
201: CIIIAEDCFQ LSSTPFDVVT GTVIQAVEKL YGGDVLKHEI LGDYVKTNVP SLKHFMSKEN TDQIYSIPSL AALSSAMRLL QRYEFKNNHG EWISAVKPDL
301: GPGISERVSD ALRTTGENID ICYSIKKELH DALAALLGDF GALMIPTVPG PPPKLQTNTS DLEIFRARAF SLLSIAGVSG FCQVSIPLGM YNNLPLSISL
401: VARHGADRFL LHLVESLYDS IKDRKQHITE HKL

Best Arabidopsis Sequence Match ( AT1G08980.1 )
(BLAST)

001: MATNNDFGAF IEKVTISPTS TSSSPPSLQG LTFAIKDIFD VEGRVTGFGN PDWLRTHSAA TSTAPVVSSL LEAGATALGI TIMDEMAYSI NGENAHYGTP
101: RNPIAFDRVP GGSSSGSAVA VAARLVDFSI GTDTGGSVRV PASYCGIFGF RPSHGAVSTV GLTPMAQSFD TVGWFARDTA TLKRVGCVLL QQHHLNPIEP
201: SQLIIADDCF KLCSVPHDLL VQPLVGSVEK SFGGNTVVKK VNLGEYIGQN VPSLKHFMTS DDVTTQQEFC IPSLMALSSS MRLLQRHEFK INHGAWISSV
301: KPEFGPGISE RIEEAIRTSD EKIDHCRSVK SELITALSTL LGEKGVLVIP TVPGPPPHLQ ANVAALESFR SRAFSLLSIA GVSGFCQVSI PLGLHENLPV
401: SVSLVAKYGS DGFLLSLVDS LAAFI

Arabidopsis Description

AMI1Amidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FR37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.