CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 1
golgi 2
plastid 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40976	Soybean	golgi	94.57	94.42
KRH63971	Soybean	cytosol, golgi, peroxisome	81.09	79.52
KRH53966	Soybean	cytosol, golgi, peroxisome	80.92	79.23
VIT_07s0031g02700.t01	Wine grape	golgi	70.56	70.33
TraesCS1A01G413700.1	Wheat	golgi	62.66	62.56
HORVU1Hr1G090770.2	Barley	endoplasmic reticulum, golgi, plasma membrane	62.34	62.23
TraesCS1B01G443700.1	Wheat	golgi	62.34	62.13
TraesCS1D01G421100.1	Wheat	golgi	62.34	62.13
Os12t0169000-00	Rice	plasma membrane	60.53	62.06
Zm00001d023543_P003	Maize	cytosol, endoplasmic reticulum, peroxisome	62.83	60.63
TraesCS4A01G206800.1	Wheat	cytosol	59.54	59.83
TraesCS4D01G108100.1	Wheat	cytosol	59.54	59.83
Solyc12g070080.1.1	Tomato	cytosol, plastid	14.64	59.73
HORVU4Hr1G019600.11	Barley	cytosol	59.05	59.34
Os11t0170000-01	Rice	peroxisome	58.22	58.03
Zm00001d004817_P002	Maize	cytosol, golgi, peroxisome	58.22	56.73
Solyc12g070090.1.1	Tomato	cytosol	20.07	56.48
OQU82976	Sorghum	peroxisome	48.68	55.74
GSMUA_Achr2P20550_001	Banana	mitochondrion	64.31	54.53
KXG23065	Sorghum	plastid	62.66	51.21
KRH10653	Soybean	cytosol	40.62	40.69
KRH21697	Soybean	cytosol	40.3	40.36
GSMUA_Achr4P18290_001	Banana	plastid	12.5	29.12
KRG98874	Soybean	mitochondrion	20.39	26.11
KRH46093	Soybean	mitochondrion	22.7	25.41
KRH58264	Soybean	golgi, plasma membrane	13.16	24.69
KRH33958	Soybean	cytosol	17.43	24.48
KRG92836	Soybean	cytosol	17.27	24.25
KRH43896	Soybean	cytosol, endoplasmic reticulum	18.75	19.06
KRH10544	Soybean	golgi	18.75	19.06
KRH41039	Soybean	mitochondrion	15.13	18.85
KRH41841	Soybean	endoplasmic reticulum	17.76	18.27
KRH59711	Soybean	plasma membrane	18.09	17.77
KRH60539	Soybean	extracellular	17.11	17.72
KRH58262	Soybean	cytosol	5.26	11.51
Os11t0170200-01	Rice	nucleus	1.81	1.22
Bra022265.1-P	Field mustard	cytosol, mitochondrion	0.0	0.0

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:1.20.58.1700	EntrezGene:100784932	Gene3D:3.90.1300.10	MapMan:35.1	EMBL:ACUP02003337
InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_CS	InterPro:Amidase_dom	EnsemblPlantsGene:GLYMA_05G195500	GO:GO:0003674
GO:GO:0003824	GO:GO:0004040	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
InterPro:IPR036928	UniProt:K7KR86	EnsemblPlants:KRH59629	ProteinID:KRH59629	ProteinID:KRH59629.1	PFAM:PF01425
ScanProsite:PS00571	PANTHER:PTHR11895	PANTHER:PTHR11895:SF67	MetaCyc:PWY-5921	SUPFAM:SSF75304	UniParc:UPI000233A840
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:37982441..37989601

Molecular Weight (calculated)

66774.7 Da

IEP (calculated)

7.315

GRAVY (calculated)

-0.013

Length

608 amino acids

Sequence
(BLAST)

001: MGLFRSKGVI YRPVKDVNLG PDSTEFYLQA NVKAPRMTGI LVKIFTWFLE SPILGPLLLY ILKGNNLIHK LITNADLEES PLYVPSHHFE DHKEQEVKCL
101: DSALTPEEQV QLAIECLPTS SEKAHNGTNS SFSRWTIMDY SRAYSSGEIT PLMVAERFIA AVNESSKPPL RMGFFIHYSA DDILRQANES TLRYKKGEPI
201: SVLDGVPVAI KDEMDCLPYP TTGGTKWLHR ERPCTDDACC VKRLRLCGAI LVGKTNMHEL GVGISGINPH YGAARNPYDT NKISGGSSSG SATVVSAGLC
301: PVALGVDGGG SVRVPASLCG VVGLKPTFGR VPHSGVLPLN WTVGMVGILA GTVEDALITY AAISGEISSH QPSNMLTKIN LPLLPLTKSI CDIKLAKYGK
401: WFDDCSDDVI LCCSRALRKL QDHYGWKTID VTIPDIEAMR LAHYLTIGSE CSTWFDSFGE KYFAEFGWDA RVALNIYGAF SGKEYIKAQK LRNRQLQFHM
501: KIFAEADVIV SPTTGVTAYS IQDDALKTGE LDYVNGAALV RYSISGNFLG LPAVTVPVGY DKLGLPIGLQ FIGRPWAEAT LIHLAFATQA ICLEYRKPKI
601: FYDLLRKN

Best Arabidopsis Sequence Match ( AT3G25660.1 )
(BLAST)

001: MLSTLQPPRS LSLLPLRRFQ ISKTIVSAAS SKTIDTSVIS PPQSQILTTR RSLLSGETTA VEIAKSYLSR IRLTEPQLKC FLHVSENVLK DAQEIDQRIA
101: KGEELGPLAG VLIGVKDNIC TQGMPSTAAS RILEHYRPPF DATAVKKIKE LGGIVVGKTN MDEFGMGSTT EASAFQVTAN PWDLSRVPGG SSGGSAAAVA
201: ARQCMVSLGS DTGGSVRQPA SFCGVVGLKP TYGRVSRFGL MAYASSLDVI GCFGSTVADA GMLLHAISGY DRFDSTSSKQ DVPEFQSQFL SVDHFESKPL
301: NGVKVGIIRE TLEDGVDSGV RSATQEAASH LEALGCILTE VSLPSFSLGL PAYYVIASSE SSSNLSRYDG VRYGNQVMAE ELNKLYECSR GEGFGGEVKM
401: RILMGTYALS AGYYDAYYKR AQQVRTLIRK DFKAALEQND ILISPAAPSA AYKIGEKKDD PLAMYAGDIM TVNVNLAGLP AMVLPCGLVE GGPSGLPVGL
501: QMIGAAFDEE KLLKVGHIFE QTLKGSSFVP PLLANVA

Arabidopsis Description

GATAGlutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.