CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46093	Soybean	mitochondrion	94.95	83.06
Bra017354.1-P	Field mustard	cytosol, peroxisome, plastid	67.37	77.29
Bra026512.1-P	Field mustard	cytosol	26.53	69.61
CDY46509	Canola	cytosol	26.53	69.61
HORVU5Hr1G093800.2	Barley	mitochondrion, plastid	52.42	67.66
VIT_12s0028g01330.t01	Wine grape	mitochondrion	77.05	67.03
AT3G25660.1	Thale cress	plastid	75.16	66.48
Solyc10g007840.2.1	Tomato	plastid	73.47	65.97
CDY59872	Canola	plastid	73.89	65.24
CDY04173	Canola	plastid	73.68	65.06
TraesCS2D01G521500.1	Wheat	plastid	70.95	62.29
TraesCS2A01G520300.1	Wheat	mitochondrion, plastid	70.74	62.11
EES11532	Sorghum	plastid	70.53	61.92
TraesCS2B01G549500.1	Wheat	mitochondrion, plastid	70.53	61.92
Zm00001d002104_P001	Maize	mitochondrion, plastid	70.53	61.36
GSMUA_Achr9P09040_001	Banana	plastid	71.37	58.55
Os04t0643200-00	Rice	plastid	62.74	55.81
PGSC0003DMT400054703	Potato	cytoskeleton, cytosol, nucleus, plastid	29.05	39.77
KRH58264	Soybean	golgi, plasma membrane	14.11	20.68
KRH59629	Soybean	golgi	26.11	20.39
KRH40976	Soybean	golgi	25.68	20.03
KRH53966	Soybean	cytosol, golgi, peroxisome	26.11	19.97
KRH10653	Soybean	cytosol	25.47	19.93
KRH21697	Soybean	cytosol	25.47	19.93
KRH33958	Soybean	cytosol	18.11	19.86
KRH63971	Soybean	cytosol, golgi, peroxisome	25.89	19.84
KRG92836	Soybean	cytosol	17.68	19.4
KRH41039	Soybean	mitochondrion	18.11	17.62
KRH60539	Soybean	extracellular	18.95	15.33
KRH41841	Soybean	endoplasmic reticulum	18.95	15.23
KRH43896	Soybean	cytosol, endoplasmic reticulum	19.16	15.22
KRH59711	Soybean	plasma membrane	19.58	15.02
KRH10544	Soybean	golgi	18.53	14.72
KRH58262	Soybean	cytosol	5.47	9.35

Protein Annotations

KEGG:00970+6.3.5.7	MapMan:17.2.8.1	Gene3D:3.90.1300.10	UniProt:A0A0R0F9I6	EMBL:ACUP02010930	InterPro:AS_sf
InterPro:Amidase	InterPro:Amidase_CS	InterPro:Amidase_dom	EnsemblPlantsGene:GLYMA_18G104200	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004040	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987
GO:GO:0016787	GO:GO:0016874	GO:GO:0016884	GO:GO:0019538	GO:GO:0030956	GO:GO:0032543
GO:GO:0050567	GO:GO:0070681	InterPro:GatA	InterPro:IPR036928	EnsemblPlants:KRG98874	ProteinID:KRG98874
ProteinID:KRG98874.1	HAMAP:MF_00120	PFAM:PF01425	ScanProsite:PS00571	PANTHER:PTHR11895	PANTHER:PTHR11895:SF141
MetaCyc:PWY-5921	SUPFAM:SSF75304	TIGRFAMs:TIGR00132	UniParc:UPI0006EE1940	SEG:seg	:

Description

hypothetical protein

Coordinates

chr18:+:11411973..11417433

Molecular Weight (calculated)

50264.7 Da

IEP (calculated)

5.817

GRAVY (calculated)

0.012

Length

475 amino acids

Sequence
(BLAST)

001: MLLSTLQTPR SLSRLTRLPH PLPSAAPHLP DDDVLLSHAR RLDAQIAAGE DPGPFAGVLV GVKDNICTAD MPSTAGSRIL EGYRAPFDAT AVKRVRELGG
101: VVVGKTNMDE FGMGSTTEAS AFQVTANPWD ESRVPGGSSG GSAAAVSARQ FVVSLGSDTG GSVRQPASFC GVVGLKPTYG RVSRFGLMAY ASSLDAIGCF
201: GSSVADTGIL LHAIAGHDRF DATSSKQDVP DFQSHFHSVS SLESKPLKGL RVGLICETID DGIDAGVISA IRAAALHFEE LGCSVNEVSL PSFSLGLPAY
301: YILAVSESSS NLSRYDGIRY GNQVYADELD SLYGGSRAKG FGSEVKMRIL MGTYSLSAGY YDAYYKRAQQ VRTIIRNSFK EALNQNDILI SPAAPSAAYK
401: IGEKKNSPLA MYAGDIMTVL PCGFVEGGHA GLPVGLQMIG AAFNEGELLR VGHIFEQTLE NCRFVPPIVA DDIAY

Best Arabidopsis Sequence Match ( AT3G25660.1 )
(BLAST)

001: MLSTLQPPRS LSLLPLRRFQ ISKTIVSAAS SKTIDTSVIS PPQSQILTTR RSLLSGETTA VEIAKSYLSR IRLTEPQLKC FLHVSENVLK DAQEIDQRIA
101: KGEELGPLAG VLIGVKDNIC TQGMPSTAAS RILEHYRPPF DATAVKKIKE LGGIVVGKTN MDEFGMGSTT EASAFQVTAN PWDLSRVPGG SSGGSAAAVA
201: ARQCMVSLGS DTGGSVRQPA SFCGVVGLKP TYGRVSRFGL MAYASSLDVI GCFGSTVADA GMLLHAISGY DRFDSTSSKQ DVPEFQSQFL SVDHFESKPL
301: NGVKVGIIRE TLEDGVDSGV RSATQEAASH LEALGCILTE VSLPSFSLGL PAYYVIASSE SSSNLSRYDG VRYGNQVMAE ELNKLYECSR GEGFGGEVKM
401: RILMGTYALS AGYYDAYYKR AQQVRTLIRK DFKAALEQND ILISPAAPSA AYKIGEKKDD PLAMYAGDIM TVNVNLAGLP AMVLPCGLVE GGPSGLPVGL
501: QMIGAAFDEE KLLKVGHIFE QTLKGSSFVP PLLANVA

Arabidopsis Description

GATAGlutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.