Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G09420.1 | KRH41747 | AT3G20000.1 | 17981999 |
| AT5G09420.1 | KRH60449 | AT3G20000.1 | 17981999 |
| AT5G09420.1 | KRH32102 | AT3G54660.1 | 17981999 |
| AT5G09420.1 | KRH71329 | AT3G54660.1 | 17981999 |
| AT5G09420.1 | KRH71332 | AT3G54660.1 | 17981999 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH43896 | Soybean | cytosol, endoplasmic reticulum | 77.34 | 35.95 |
| KRH10544 | Soybean | golgi | 76.98 | 35.79 |
| VIT_12s0028g00300.t01 | Wine grape | cytosol | 77.34 | 35.42 |
| Solyc10g047300.1.1 | Tomato | plastid | 65.83 | 30.6 |
| HORVU6Hr1G078210.1 | Barley | mitochondrion | 61.15 | 30.47 |
| CDY21581 | Canola | cytosol | 64.03 | 29.52 |
| AT5G09420.1 | Thale cress | cytosol | 62.59 | 28.86 |
| GSMUA_Achr9P14860_001 | Banana | mitochondrion | 64.39 | 28.73 |
| TraesCS6A01G318800.1 | Wheat | plastid | 61.87 | 28.24 |
| TraesCS6D01G298000.1 | Wheat | plastid | 61.15 | 27.91 |
| TraesCS6B01G349000.1 | Wheat | plastid | 60.79 | 27.75 |
| KXG30729 | Sorghum | plastid | 58.27 | 26.38 |
| Zm00001d018098_P005 | Maize | plasma membrane | 57.91 | 26.22 |
| Os02t0754500-01 | Rice | cytosol, mitochondrion, plastid | 56.83 | 25.77 |
| KRH41841 | Soybean | endoplasmic reticulum | 53.96 | 25.38 |
| KRH60539 | Soybean | extracellular | 53.24 | 25.21 |
| Bra009383.1-P | Field mustard | cytosol, plastid | 65.11 | 19.61 |
| KRH33958 | Soybean | cytosol | 23.02 | 14.78 |
| KRG92836 | Soybean | cytosol | 23.02 | 14.78 |
| KRG98874 | Soybean | mitochondrion | 9.35 | 5.47 |
| KRH59629 | Soybean | golgi | 11.51 | 5.26 |
| KRH46093 | Soybean | mitochondrion | 9.71 | 4.97 |
| KRH40976 | Soybean | golgi | 10.79 | 4.93 |
| KRH63971 | Soybean | cytosol, golgi, peroxisome | 10.79 | 4.84 |
| KRH53966 | Soybean | cytosol, golgi, peroxisome | 10.43 | 4.67 |
| KRH21697 | Soybean | cytosol | 9.35 | 4.28 |
| KRH10653 | Soybean | cytosol | 9.35 | 4.28 |
| KRH41039 | Soybean | mitochondrion | 6.47 | 3.69 |
| KRH59711 | Soybean | plasma membrane | 6.12 | 2.75 |
| PGSC0003DMT400042984 | Potato | extracellular, plasma membrane | 1.44 | 1.2 |
| KRH58264 | Soybean | golgi, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| KEGG:00970+6.3.5.7 | Gene3D:1.25.40.10 | Gene3D:3.90.1300.10 | MapMan:35.1 | UniProt:A0A0R0JTX8 | EMBL:ACUP02003243 |
| InterPro:AS_sf | InterPro:Amidase | EnsemblPlantsGene:GLYMA_05G1167002 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004040 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0016787 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
| InterPro:IPR036928 | EnsemblPlants:KRH58262 | ProteinID:KRH58262 | ProteinID:KRH58262.1 | PFscan:PS50005 | PFscan:PS50293 |
| PANTHER:PTHR11895 | PANTHER:PTHR11895:SF92 | MetaCyc:PWY-5921 | SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF75304 |
| InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI0006EDDE6F | : | : |
Description
hypothetical protein
Coordinates
chr5:-:30941359..30944857
Molecular Weight (calculated)
31079.1 Da
IEP (calculated)
8.368
GRAVY (calculated)
-0.295
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: YEFKTNHEEW VKSLKYKLGC GVSDHVIAAI NTTYDNIKAL YKVRTEMRGA FQSLLKDDGI LVIPTVAGSQ LKLNTKKGFS SEFHDRTFAL SSIASVSGCC
101: QVTIPLGYHD DCSLSVSFIS FHGADKFLLD TILDIYSTLQ EQVSVGSYSL PLPNINGNRE TSELLKEKGN AAFKERQWSK ALSYYSEAIK LNGTNTTYYC
201: NRAAAHLKLG CFQQAAEDCG KAILLDKKNV KAYLRRGTAR ESLLCYEEAL EDFKHALVLE PQNKDASLAE KRLRKLMS
101: QVTIPLGYHD DCSLSVSFIS FHGADKFLLD TILDIYSTLQ EQVSVGSYSL PLPNINGNRE TSELLKEKGN AAFKERQWSK ALSYYSEAIK LNGTNTTYYC
201: NRAAAHLKLG CFQQAAEDCG KAILLDKKNV KAYLRRGTAR ESLLCYEEAL EDFKHALVLE PQNKDASLAE KRLRKLMS
001: MASQAANLWV LLGLGLAGIL MLTKKLKKTV REDFGAFIDK LMLLPPPQPA PPKAPHPLTG LTFAVSDVFD ITGYVTGFGH PDWVRTHEAA SSTSPVVSTL
101: VEGGATCVGK TVVDEFAFSI SGENKHYDSP TNPAAPTRIP GGACSGAAVA VATNAVDFAL GIDTVGGVRV PAGYCGVLGF KSSYGAISNT GIIPVSSSLD
201: SVGWFARDPN TLRRVGHVLL QLPFATQRNP RQIILADDCF QLLKIPVDRI TQVVTKSAEK LFGRQLLKHQ NLETYFETKV PSLKEFARTK AIANTKVSTS
301: RLLANVMQLL QRHEFLQNHG DWINTVKPAI DPVILSQVCE NPELTNEETE NLNAIRNETR VAIGSLLKDD GILVIPTLPA VPPKLGSKEI TSEDYQNRAS
401: SLLSIASISG CCQVTVPLGH HEKCPISVSF IGRHGGDRFL LDTVQTMYPS LQEYSSIVTD PKSSKKAITK EESAEIAKEK GNQAFKEKLW QKAIGLYSEA
501: IKLSDNNATY YSNRAAAYLE LGGFLQAEED CTKAITLDKK NVKAYLRRGT AREMLGDCKG AIEDFRYALV LEPNNKRASL SAERLRKFQ
101: VEGGATCVGK TVVDEFAFSI SGENKHYDSP TNPAAPTRIP GGACSGAAVA VATNAVDFAL GIDTVGGVRV PAGYCGVLGF KSSYGAISNT GIIPVSSSLD
201: SVGWFARDPN TLRRVGHVLL QLPFATQRNP RQIILADDCF QLLKIPVDRI TQVVTKSAEK LFGRQLLKHQ NLETYFETKV PSLKEFARTK AIANTKVSTS
301: RLLANVMQLL QRHEFLQNHG DWINTVKPAI DPVILSQVCE NPELTNEETE NLNAIRNETR VAIGSLLKDD GILVIPTLPA VPPKLGSKEI TSEDYQNRAS
401: SLLSIASISG CCQVTVPLGH HEKCPISVSF IGRHGGDRFL LDTVQTMYPS LQEYSSIVTD PKSSKKAITK EESAEIAKEK GNQAFKEKLW QKAIGLYSEA
501: IKLSDNNATY YSNRAAAYLE LGGFLQAEED CTKAITLDKK NVKAYLRRGT AREMLGDCKG AIEDFRYALV LEPNNKRASL SAERLRKFQ
Arabidopsis Description
OEP64Outer envelope protein 64, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH5]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.