CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

cytosol 2
golgi 1
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63971	Soybean	cytosol, golgi, peroxisome	97.75	97.9
KRH59629	Soybean	golgi	79.23	80.92
KRH40976	Soybean	golgi	78.91	80.46
VIT_07s0031g02700.t01	Wine grape	golgi	67.63	68.85
HORVU1Hr1G090770.2	Barley	endoplasmic reticulum, golgi, plasma membrane	61.35	62.56
TraesCS1A01G413700.1	Wheat	golgi	61.35	62.56
TraesCS1B01G443700.1	Wheat	golgi	61.19	62.3
TraesCS1D01G421100.1	Wheat	golgi	61.03	62.13
Os12t0169000-00	Rice	plasma membrane	59.1	61.89
Zm00001d023543_P003	Maize	cytosol, endoplasmic reticulum, peroxisome	60.39	59.52
TraesCS4D01G108100.1	Wheat	cytosol	57.81	59.34
TraesCS4A01G206800.1	Wheat	cytosol	57.81	59.34
HORVU4Hr1G019600.11	Barley	cytosol	56.68	58.18
Os11t0170000-01	Rice	peroxisome	56.84	57.87
Solyc12g070080.1.1	Tomato	cytosol, plastid	13.85	57.72
Zm00001d004817_P002	Maize	cytosol, golgi, peroxisome	56.84	56.57
OQU82976	Sorghum	peroxisome	47.99	56.12
Solyc12g070090.1.1	Tomato	cytosol	19.16	55.09
GSMUA_Achr2P20550_001	Banana	mitochondrion	62.64	54.25
KXG23065	Sorghum	plastid	60.87	50.81
KRH10653	Soybean	cytosol	40.74	41.68
KRH21697	Soybean	cytosol	40.42	41.35
GSMUA_Achr4P18290_001	Banana	plastid	12.4	29.5
KRG98874	Soybean	mitochondrion	19.97	26.11
KRH46093	Soybean	mitochondrion	22.22	25.41
KRH58264	Soybean	golgi, plasma membrane	11.92	22.84
KRG92836	Soybean	cytosol	15.78	22.63
KRH33958	Soybean	cytosol	15.62	22.4
KRH43896	Soybean	cytosol, endoplasmic reticulum	18.2	18.9
KRH10544	Soybean	golgi	18.04	18.73
KRH41039	Soybean	mitochondrion	14.65	18.65
KRH41841	Soybean	endoplasmic reticulum	17.23	18.1
KRH59711	Soybean	plasma membrane	17.55	17.61
KRH60539	Soybean	extracellular	16.59	17.55
KRH58262	Soybean	cytosol	4.67	10.43
Os11t0170200-01	Rice	nucleus	1.61	1.11
Bra022265.1-P	Field mustard	cytosol, mitochondrion	0.0	0.0

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:1.20.58.1700	EntrezGene:100775876	Gene3D:3.90.1300.10	MapMan:35.1	EMBL:ACUP02003491
InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_CS	InterPro:Amidase_dom	ncoils:Coil	EnsemblPlantsGene:GLYMA_06G158000
GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0016787	InterPro:IPR036928	UniProt:K7KVA7
EnsemblPlants:KRH53966	ProteinID:KRH53966	ProteinID:KRH53966.1	PFAM:PF01425	ScanProsite:PS00571	PANTHER:PTHR11895
PANTHER:PTHR11895:SF67	MetaCyc:PWY-5921	SUPFAM:SSF75304	UniParc:UPI0002338339	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:12971547..12978296

Molecular Weight (calculated)

68313.5 Da

IEP (calculated)

6.506

GRAVY (calculated)

-0.020

Length

621 amino acids

Sequence
(BLAST)

001: MEFLNGKGVV YTPLKDVDLG PYSTEFYLQA NVKAPRMTGL LVKIFTHLLE CPILGTLLLF ILKGNNLIHR LITNAEFKES PLFVPLHDFE DLKEKEVKCL
101: DSSLSPPEKV QLALDCLPKS SEETLDGTNS SFCRWTIMDY AKAYYSGDLT PSLVAERFIA AIDESTKPPL QMGFFIHYSA DDILKQATES TLRYQRGEPI
201: SVLDGVPVAI KDEIDCLPYP TTGGTTWLHK ERPCSDDACC VKRLRLCGAI LVGKTNMHEL GSGTSGINPH YGPARNPYDT NKIAGGSSSG SASLVSAGLC
301: PVALGVDGGG SVRMPAALCG VVGLKPTFER IPHEGVLPLN WTVGMVGILA GTVEDALIVY AAISGEIPYH KTFSVSTKIN LPRLSLTKSI SDIKLAKYGK
401: WFDDCSDDVR ICCTKTLHKL QDHYNWKIID VTIPEIEAMR LAHYITIGSE CSTALDSFKE KNFAELGWDV RVAQSIYGAF SSLEYLKAQK MRNRQLQFHK
501: KIFAEADVIV SPTTGVTAYP IQDDALQTGE LDYVNGAALV RYSIAGNFLG LPAVTVPVGF DRLGLPIGLQ FIGRPWSEAT LIHLAFAMQV ICMSEYRKPE
601: LYYDLLRRKN SSSNGMSFEA K

Best Arabidopsis Sequence Match ( AT3G25660.1 )
(BLAST)

001: MLSTLQPPRS LSLLPLRRFQ ISKTIVSAAS SKTIDTSVIS PPQSQILTTR RSLLSGETTA VEIAKSYLSR IRLTEPQLKC FLHVSENVLK DAQEIDQRIA
101: KGEELGPLAG VLIGVKDNIC TQGMPSTAAS RILEHYRPPF DATAVKKIKE LGGIVVGKTN MDEFGMGSTT EASAFQVTAN PWDLSRVPGG SSGGSAAAVA
201: ARQCMVSLGS DTGGSVRQPA SFCGVVGLKP TYGRVSRFGL MAYASSLDVI GCFGSTVADA GMLLHAISGY DRFDSTSSKQ DVPEFQSQFL SVDHFESKPL
301: NGVKVGIIRE TLEDGVDSGV RSATQEAASH LEALGCILTE VSLPSFSLGL PAYYVIASSE SSSNLSRYDG VRYGNQVMAE ELNKLYECSR GEGFGGEVKM
401: RILMGTYALS AGYYDAYYKR AQQVRTLIRK DFKAALEQND ILISPAAPSA AYKIGEKKDD PLAMYAGDIM TVNVNLAGLP AMVLPCGLVE GGPSGLPVGL
501: QMIGAAFDEE KLLKVGHIFE QTLKGSSFVP PLLANVA

Arabidopsis Description

GATAGlutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.