Factsheet for GSMUA_Achr4P18290_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g070080.1.1	Tomato	cytosol, plastid	17.62	30.87
VIT_07s0031g02700.t01	Wine grape	golgi	31.8	13.61
KRH59629	Soybean	golgi	29.12	12.5
KRH63971	Soybean	cytosol, golgi, peroxisome	29.5	12.42
GSMUA_Achr2P20550_001	Banana	mitochondrion	34.1	12.41
KRH53966	Soybean	cytosol, golgi, peroxisome	29.5	12.4
KRH40976	Soybean	golgi	28.74	12.32
GSMUA_Achr9P09040_001	Banana	plastid	16.86	7.6
GSMUA_Achr3P09030_001	Banana	cytosol, plasma membrane	11.88	7.42
GSMUA_Achr4P18300_001	Banana	cytosol	10.73	7.04
GSMUA_Achr1P21290_001	Banana	endoplasmic reticulum	12.64	5.57
GSMUA_Achr9P14860_001	Banana	mitochondrion	9.96	4.17
Solyc12g070090.1.1	Tomato	cytosol	3.07	3.7
Bra022265.1-P	Field mustard	cytosol, mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr4P18290_001	EnsemblPlants:GSMUA_Achr4T18290_001	EnsemblPlantsGene:GSMUA_Achr4G18290_001	Gene3D:3.90.1300.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004040	GO:GO:0016787	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR11895	PANTHER:PTHR11895:SF44	PFAM:PF01425	SEG:seg	SUPFAM:SSF75304
UniParc:UPI0002951581	UniProt:M0SPZ2	MapMan:35.1	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G18290_001]

Coordinates

chr4:-:19034126..19056365

Molecular Weight (calculated)

29342.4 Da

IEP (calculated)

9.098

GRAVY (calculated)

-0.169

Length

261 amino acids

Sequence
(BLAST)

001: MPILQWFGQM TYIHLQGPPS MRLPPSTSKS LEMEGQIPLL QPFTSGSLSY RFLARKKEVN TSKLKTRLAK TFLRPFSQTI AAQKVVFSSP LCCPNLSSSN
101: NLNILQSVRL GKYTEWFNDV SNNDISNKCE DAVNLLSANF GCQIIEITLP EIEEMRTAHV VSIGSESLCG LNAYRGERKY SELTLDTRTS LALFRSFSAA
201: DYVAAQRLRR RIMYYYMEAF KKVDIIVTPT TGITAPKIPL SSLQYGESNY ETSGMLDTIS L

Best Arabidopsis Sequence Match ( AT5G64440.1 )
(BLAST)

001: MGKYQVMKRA SEVDLSTVKY KAETMKAPHL TGLSFKLFVN LLEAPLIGSL IVDYLKKDNG MTKIFRNTVI PEEPMFRPEF PSQEPEHDVV IVGEDESPID
101: RLETALKCLP QYDPSRSLHA DPVSSFRYWK IRDYAYAYRS KLTTPLQVAK RIISIIEEFG YDKPPTPFLI RFDANEVIKQ AEASTRRFEQ GNPISVLDGI
201: FVTIKDDIDC LPHPTNGGTT WLHEDRSVEK DSAVVSKLRS CGAILLGKAN MHELGMGTTG NNSNYGTTRN PHDPKRYTGG SSSGSAAIVA AGLCSAALGT
301: DGGGSVRIPS ALCGITGLKT TYGRTDMTGS LCEGGTVEII GPLASSLEDA FLVYAAILGS SSADRYNLKP SPPCFPKLLS HNGSNAIGSL RLGKYTKWFN
401: DVSSSDISDK CEDILKLLSN NHGCKVVEIV VPELEEMRAA HVISIGSPTL SSLTPYCEAG KNSKLSYDTR TSFAIFRSFS ASDYIAAQCL RRRLMEYHLN
501: IFKDVDVIVT PTTGMTAPVI PPDALKNGET NIQVTTDLMR FVLAANLLGF PAISVPVGYD KEGLPIGLQI MGRPWAEATV LGLAAAVEEL APVTKKPAIF
601: YDILNTN

Arabidopsis Description

FAAHFatty acid amide hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q7XJJ7]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.