Factsheet for GSMUA_Achr2P20550_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 3
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0169000-00	Rice	plasma membrane	61.37	74.2
TraesCS1A01G413700.1	Wheat	golgi	61.51	72.41
HORVU1Hr1G090770.2	Barley	endoplasmic reticulum, golgi, plasma membrane	61.09	71.92
TraesCS1D01G421100.1	Wheat	golgi	61.09	71.8
TraesCS1B01G443700.1	Wheat	golgi	61.09	71.8
TraesCS4A01G206800.1	Wheat	cytosol	59.55	70.58
Zm00001d023543_P003	Maize	cytosol, endoplasmic reticulum, peroxisome	61.79	70.32
HORVU4Hr1G019600.11	Barley	cytosol	59.27	70.25
TraesCS4D01G108100.1	Wheat	cytosol	58.72	69.59
Zm00001d004817_P002	Maize	cytosol, golgi, peroxisome	58.44	67.15
OQU82976	Sorghum	peroxisome	49.65	67.04
VIT_07s0031g02700.t01	Wine grape	golgi	56.9	66.89
Os11t0170000-01	Rice	peroxisome	56.35	66.23
KRH40976	Soybean	golgi	55.09	64.86
KRH59629	Soybean	golgi	54.53	64.31
KXG23065	Sorghum	plastid	65.83	63.44
KRH53966	Soybean	cytosol, golgi, peroxisome	54.25	62.64
KRH63971	Soybean	cytosol, golgi, peroxisome	54.11	62.58
Solyc12g070080.1.1	Tomato	cytosol, plastid	12.13	58.39
Solyc12g070090.1.1	Tomato	cytosol	14.23	47.22
GSMUA_Achr4P18300_001	Banana	cytosol	22.73	40.95
GSMUA_Achr4P18290_001	Banana	plastid	12.41	34.1
GSMUA_Achr9P09040_001	Banana	plastid	19.11	23.66
GSMUA_Achr3P09030_001	Banana	cytosol, plasma membrane	11.86	20.33
GSMUA_Achr1P21290_001	Banana	endoplasmic reticulum	15.62	18.92
GSMUA_Achr9P14860_001	Banana	mitochondrion	15.06	17.34
Os11t0170200-01	Rice	nucleus	1.26	1.0
Bra022265.1-P	Field mustard	cytosol, mitochondrion	0.0	0.0

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:3.90.1300.10	MapMan:35.1	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr2G20550_001	EnsemblPlants:GSMUA_Achr2P20550_001	EnsemblPlants:GSMUA_Achr2T20550_001	InterPro:IPR036928	UniProt:M0S9P6
PFAM:PF01425	PANTHER:PTHR11895	PANTHER:PTHR11895:SF135	SUPFAM:SSF75304	TMHMM:TMhelix	UniParc:UPI000295BC69
SEG:seg	:	:	:	:	:

Description

Putative Glutamyl-tRNA(Gln) amidotransferase subunit A [Source:GMGC_GENE;Acc:GSMUA_Achr2G20550_001]

Coordinates

chr2:-:20337881..20347099

Molecular Weight (calculated)

78915.2 Da

IEP (calculated)

8.650

GRAVY (calculated)

0.002

Length

717 amino acids

Sequence
(BLAST)

001: MVTRNRTTSS FHPSLSLSRF APTYYSSSFS LFSFHYSLSL SLSLLGILCF LSYYSLANSA PKHLSLSPPL FLYIYVYTHA QTIQRTHRGA GGCRRLRRVH
101: IGVKAMGLFR DAGKAYKPAP EVDLGAHSDE FYLHANVKAP RVAGLLVKIF VWILESPILG SIVLYILKKD NLIQRLVSVA EIQEPPLFTA THSSEDISEQ
201: SVTPIKPNLS PAERVQEAAS CLPPCLDSSF TDSASQFKRW TIRDFFRAYK SGETTPLEVA RRFLAAAKET EDPKLHMAFF ISYSHEDILR QAEESSRRYH
301: RGTPISMMDG VLVAIKDEID CMPYPTTGGT RWLHKVRPCI EDASCVKHLR SCGAILAGKT NMHELGAGAS GINPHYGATR NPYDINKISG GSSSGSAAAV
401: CAGLCPVALG VDGGGSVRMP AALCGIVGFK PTSGRLSNSG ILPLNWTVGM PGILAATVED ALITYAAICD HLPFSQPTFL QPSLNFPLLD SMQSITNIKL
501: AKYGKWFNDS TIDIRNCCDQ TLKMLSQHYG WKIVDVTVPE IEEMRLAHYI TIGSECTASL APHLSKLDYA EIGWDARVAL SVYGSFSSRD YLNAQRIRNR
601: QMYFHKEIFK RADVIVTPTT GVTAYPLLSD AADTGELDYI NGAALVRFSI AGNFLGLPAV TLLVGYDKGG LPIGLQFIGR PWSEATLLHL AFAMQTLCIK
701: SYKRPKVFYD LLKKEQA

Best Arabidopsis Sequence Match ( AT5G64440.1 )
(BLAST)

001: MGKYQVMKRA SEVDLSTVKY KAETMKAPHL TGLSFKLFVN LLEAPLIGSL IVDYLKKDNG MTKIFRNTVI PEEPMFRPEF PSQEPEHDVV IVGEDESPID
101: RLETALKCLP QYDPSRSLHA DPVSSFRYWK IRDYAYAYRS KLTTPLQVAK RIISIIEEFG YDKPPTPFLI RFDANEVIKQ AEASTRRFEQ GNPISVLDGI
201: FVTIKDDIDC LPHPTNGGTT WLHEDRSVEK DSAVVSKLRS CGAILLGKAN MHELGMGTTG NNSNYGTTRN PHDPKRYTGG SSSGSAAIVA AGLCSAALGT
301: DGGGSVRIPS ALCGITGLKT TYGRTDMTGS LCEGGTVEII GPLASSLEDA FLVYAAILGS SSADRYNLKP SPPCFPKLLS HNGSNAIGSL RLGKYTKWFN
401: DVSSSDISDK CEDILKLLSN NHGCKVVEIV VPELEEMRAA HVISIGSPTL SSLTPYCEAG KNSKLSYDTR TSFAIFRSFS ASDYIAAQCL RRRLMEYHLN
501: IFKDVDVIVT PTTGMTAPVI PPDALKNGET NIQVTTDLMR FVLAANLLGF PAISVPVGYD KEGLPIGLQI MGRPWAEATV LGLAAAVEEL APVTKKPAIF
601: YDILNTN

Arabidopsis Description

FAAHFatty acid amide hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q7XJJ7]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.