Factsheet for GSMUA_Achr4P18300_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400008086	Potato	cytosol, peroxisome, plastid	67.09	43.91
Solyc01g106360.2.1	Tomato	plastid	66.33	43.42
VIT_03s0097g00620.t01	Wine grape	cytosol, nucleus, plasma membrane	65.83	43.16
KRH10653	Soybean	cytosol	65.83	43.16
KRH21697	Soybean	cytosol	64.82	42.5
Solyc01g106350.2.1	Tomato	cytosol	64.07	42.5
CDY46805	Canola	cytosol	64.57	42.06
CDY58262	Canola	cytosol	64.82	41.88
CDY31318	Canola	cytosol	64.32	41.76
Bra031917.1-P	Field mustard	cytosol	63.82	41.44
CDX84527	Canola	cytosol	64.07	41.4
AT5G64440.1	Thale cress	cytosol, nucleus, peroxisome	63.07	41.35
TraesCS2D01G040000.1	Wheat	cytosol	61.81	41.28
EES11732	Sorghum	cytosol, nucleus, plastid	64.07	41.26
TraesCS2A01G041400.1	Wheat	plastid	62.06	40.62
TraesCS2A01G041300.1	Wheat	golgi	62.81	40.58
TraesCS2B01G053800.1	Wheat	cytosol	61.81	40.39
TraesCS2B01G053700.1	Wheat	mitochondrion, nucleus, peroxisome	62.06	40.1
TraesCS2D01G039700.2	Wheat	cytoskeleton, cytosol, peroxisome	61.81	39.94
TraesCS2D01G039600.2	Wheat	mitochondrion, nucleus, peroxisome	62.56	39.71
Zm00001d024936_P002	Maize	mitochondrion	61.81	35.55
TraesCS2D01G039900.1	Wheat	mitochondrion	51.01	33.44
GSMUA_Achr2P20550_001	Banana	mitochondrion	40.95	22.73
GSMUA_Achr9P09040_001	Banana	plastid	20.85	14.34
GSMUA_Achr3P09030_001	Banana	cytosol, plasma membrane	14.07	13.4
GSMUA_Achr4P18290_001	Banana	plastid	7.04	10.73
GSMUA_Achr9P14860_001	Banana	mitochondrion	16.33	10.43
GSMUA_Achr1P21290_001	Banana	endoplasmic reticulum	15.08	10.14

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:3.90.1300.10	MapMan:35.1	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_CS
InterPro:Amidase_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr4G18300_001	EnsemblPlants:GSMUA_Achr4P18300_001	EnsemblPlants:GSMUA_Achr4T18300_001	InterPro:IPR036928
UniProt:M0SPZ3	PFAM:PF01425	ScanProsite:PS00571	PANTHER:PTHR11895	PANTHER:PTHR11895:SF67	SUPFAM:SSF75304
UniParc:UPI000295E9C5	SEG:seg	:	:	:	:

Description

amidase family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G18300_001]

Coordinates

chr4:-:19056685..19077565

Molecular Weight (calculated)

43525.3 Da

IEP (calculated)

7.247

GRAVY (calculated)

-0.071

Length

398 amino acids

Sequence
(BLAST)

001: MSRKKRVMLP VAEVDISNIK YTPQHIQAPH LTGFGFMLFT WLMEAPLIGS LITSFLKHKN GVTEMLRNTV IPERPMFRPE FPPQDPETGV VVLDEDRHPI
101: ARLEAAMECL PLYDPSRHWN PDRPSNFLYW TIRDYAHAYR SDITTPLIVA ERIISAVDEF NGKKPPVPLL ISFNADEVRK QAADSTERFR AGNPLSIIDG
201: VFIAIKDDID CYPHPTKGAT TWFHEVRTVK QDAVCVSRLR SCGVILVGKA NMHELGLGTT GNNPNYGTAR NPYSFERYTG GSSSGPAALV ASGICSAAVG
301: TDGGGSVRIP SSLCGIVGLK TTFARTDMTG SLCDCGTVEV VSPLAATVED AMLVYAAMAG SSKADRISLN PFMSLTSVQR KLYISTPCSV FYDSFHAA

Best Arabidopsis Sequence Match ( AT5G64440.1 )
(BLAST)

001: MGKYQVMKRA SEVDLSTVKY KAETMKAPHL TGLSFKLFVN LLEAPLIGSL IVDYLKKDNG MTKIFRNTVI PEEPMFRPEF PSQEPEHDVV IVGEDESPID
101: RLETALKCLP QYDPSRSLHA DPVSSFRYWK IRDYAYAYRS KLTTPLQVAK RIISIIEEFG YDKPPTPFLI RFDANEVIKQ AEASTRRFEQ GNPISVLDGI
201: FVTIKDDIDC LPHPTNGGTT WLHEDRSVEK DSAVVSKLRS CGAILLGKAN MHELGMGTTG NNSNYGTTRN PHDPKRYTGG SSSGSAAIVA AGLCSAALGT
301: DGGGSVRIPS ALCGITGLKT TYGRTDMTGS LCEGGTVEII GPLASSLEDA FLVYAAILGS SSADRYNLKP SPPCFPKLLS HNGSNAIGSL RLGKYTKWFN
401: DVSSSDISDK CEDILKLLSN NHGCKVVEIV VPELEEMRAA HVISIGSPTL SSLTPYCEAG KNSKLSYDTR TSFAIFRSFS ASDYIAAQCL RRRLMEYHLN
501: IFKDVDVIVT PTTGMTAPVI PPDALKNGET NIQVTTDLMR FVLAANLLGF PAISVPVGYD KEGLPIGLQI MGRPWAEATV LGLAAAVEEL APVTKKPAIF
601: YDILNTN

Arabidopsis Description

FAAHFatty acid amide hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q7XJJ7]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.